Transcript Information: S_Transcript_211073.p1


Annotated TAIR IDATMG00300.1
Annotated Gene NameGag-Pol-related retrotransposon family protein
Annotated Gene Symbol(s)ORF145A
Annotation TypeHomolog
Chromosome PositionchrM:89617-90054 | Reverse length=145
E-Value1E-05
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.6633125771988
Replicate 22.068386521017
Replicate 31.4408387565313
Condition 2: 8 Hour
Replicate 11.1662322829682
Replicate 21.3982405399829
Replicate 30.9991803564835
Condition 3: 24 Hour
Replicate 11.7066315227027
Replicate 23.5412205588043
Replicate 30.98523610957485


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_211073.p1 GENE.S_Transcript_211073~~S_Transcript_211073.p1 ORF type:3prime_partial len:128 (+),score=10.42,gag_pre-integrs|PF13976.2|1.6e-11 S_Transcript_211073:473-853(+)
ATGAGGCCGATTGGTGTGGGTGAATTGCGAAACAGAGTTTATTATTACAGGCCATTGACACTTGCTTCTTCCGCAGCCGTGACAACATCTTCAGATTCTATTGAATTATGGCATCAACGTTTGGGACATCCATCAAGCAAGCAACTTTCATTTGTTCCTGTAGTTCAGTCTAGTTCTCAAAAACAAAATAAACTTTGTGATGTTTGTTGTCGAGCTAAACAAACTCGAAATAGTTTCCCTACAAGTGACTATCTTGCTAAAGATTGTTTTCAATTAATTCATTGTGATATTTGGGGTCCCTATTGTGTGGGTACTATTACAGGTGCTCGTTATTTTTTAACTATTGTTGATGATTATAGCCGTGCTGTTTGGGTATATTTG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_211073.p1 GENE.S_Transcript_211073~~S_Transcript_211073.p1 ORF type:3prime_partial len:128 (+),score=10.42,gag_pre-integrs|PF13976.2|1.6e-11 S_Transcript_211073:473-853(+)
MRPIGVGELRNRVYYYRPLTLASSAAVTTSSDSIELWHQRLGHPSSKQLSFVPVVQSSSQKQNKLCDVCCRAKQTRNSFPTSDYLAKDCFQLIHCDIWGPYCVGTITGARYFLTIVDDYSRAVWVYL

Click here to download the sequence:
Link to NCBI Protein BLAST