Transcript Information: S_Transcript_211447.p1


Annotated TAIR IDAT1G74410.1
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:27965723-27967681 | Forward length=223
E-Value3E-89
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 114.30698938583
Replicate 221.813961103859
Replicate 321.008079072673
Condition 2: 8 Hour
Replicate 142.410268713396
Replicate 239.697415631395
Replicate 336.86199209884
Condition 3: 24 Hour
Replicate 126.279559086429
Replicate 222.40820467887
Replicate 322.567092362472


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_211447.p1 GENE.S_Transcript_211447~~S_Transcript_211447.p1 ORF type:complete len:266 (+),score=68.76,zf-RING_2|PF13639.2|2.1e+03,zf-RING_2|PF13639.2|1.8e+03,zf-RING_2|PF13639.2|8.6e-12,zf-RING_11|PF17123.1|2.2e+03,zf-RING_11|PF17123.1|4.6e-09,zf-RING_11|PF17123.1|1.1e+04,zf-rbx1|PF12678.3|2.6e+03,zf-rbx1|PF12678.3|4e-06,zf-C3HC4_2|PF13923.2|1.6e+04,zf-C3HC4_2|PF13923.2|5.6e-06 S_Transcript_211447:360-1157(+)
ATGGATGTGGTGCATCATCATCAGTGCACTTGTAGTAGTAGCTCACTCCTGAATGCTTCTCAGCCTTGTGGGCTTTGTGGGAATTCTGGGTTGGGCTCAGAAGCCCAATCAAGATCAACAACCCCTGATATGGTGGAGGATTCTATTTCTGTTGATGGGTCTTTTCAGGACAGAGAGATTAGGGTTTATGATTATATTCCCAAGTTGATTGGTGGTGCTCTTTCTGGTGCTCTCACTGGCATTTTTGCTCTTGCTGGTGCTTTCACTGGAGCTGTAACTGGTGCTCTAGCGGGCAGGGCTTCTGACAGTGGCCTCCTAAGAGGTGCTGGGCTAGGTGCTGTTGCTGGTGCAGTTCTGTCTGTGGAGGTCTTAGAAGCTTCTCGGGCTTATTGGTGCTCACAACAATCTGGTTTACGGAGTCCATCATCAATGGCAGATTTCATAGAGGAGCTTCTCCATGGGAGGTTCGTTGAGGAACAATTACCAACTACAGTACTAACTGGGTACTACTGGCAGGCAAGCATTGCAAATGTCATTTATGACGATATTTATGACCCCTATGGTGATGCTGCACCGAGAGGGTTATCTGGGGATTCACTCAAGAGGCTACCATGTCATGTGATCTTGGATGTGAACAAAACAACCAGCAACATATGTTGCACAATTTGTTTGCAGGATTTTGAGGTAGGAGAAACTGCAAGGAGCTTGCCGCACTGCCAGCACACATTTCACCTAAACTGTGTGGATAGGTGGCTTGTAAGACATGGTTCGTGCCCTGTTTGCAGGCGGGAAGTCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_211447.p1 GENE.S_Transcript_211447~~S_Transcript_211447.p1 ORF type:complete len:266 (+),score=68.76,zf-RING_2|PF13639.2|2.1e+03,zf-RING_2|PF13639.2|1.8e+03,zf-RING_2|PF13639.2|8.6e-12,zf-RING_11|PF17123.1|2.2e+03,zf-RING_11|PF17123.1|4.6e-09,zf-RING_11|PF17123.1|1.1e+04,zf-rbx1|PF12678.3|2.6e+03,zf-rbx1|PF12678.3|4e-06,zf-C3HC4_2|PF13923.2|1.6e+04,zf-C3HC4_2|PF13923.2|5.6e-06 S_Transcript_211447:360-1157(+)
MDVVHHHQCTCSSSSLLNASQPCGLCGNSGLGSEAQSRSTTPDMVEDSISVDGSFQDREIRVYDYIPKLIGGALSGALTGIFALAGAFTGAVTGALAGRASDSGLLRGAGLGAVAGAVLSVEVLEASRAYWCSQQSGLRSPSSMADFIEELLHGRFVEEQLPTTVLTGYYWQASIANVIYDDIYDPYGDAAPRGLSGDSLKRLPCHVILDVNKTTSNICCTICLQDFEVGETARSLPHCQHTFHLNCVDRWLVRHGSCPVCRREV*

Click here to download the sequence:
Link to NCBI Protein BLAST