Transcript Information: S_Transcript_211603.p1


Annotated TAIR IDAT1G05670.1
Annotated Gene NamePentatricopeptide repeat (PPR-like) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:1698574-1700799 | Reverse length=741
E-Value2E-34
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.97364638665294
Replicate 20.89686136412662
Replicate 31.0495866063838
Condition 2: 8 Hour
Replicate 11.1269515208241
Replicate 21.3641371121785
Replicate 30.77984808310907
Condition 3: 24 Hour
Replicate 12.1312081454238
Replicate 20.73703452280805
Replicate 30.51264317896577


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_211603.p1 GENE.S_Transcript_211603~~S_Transcript_211603.p1 ORF type:3prime_partial len:246 (-),score=39.84,PPR_1|PF12854.3|1.9,PPR_1|PF12854.3|3e-13,PPR_1|PF12854.3|8e-11,PPR_1|PF12854.3|1.4e-06,PPR_1|PF12854.3|8.6e-09,PPR_1|PF12854.3|0.00027,PPR_2|PF13041.2|1.2,PPR_2|PF13041.2|1.8e-21,PPR_2|PF13041.2|1.1e-14,PPR_2|PF13041.2|1.4e-14,PPR|PF01535.16|9.9,PPR|PF01535.16|1.5e-09,PPR|PF01535.16|5.8e-06,PPR|PF01535.16|7.7e-05,PPR|PF01535.16|3.6e-06,PPR|PF01535.16|5.1,PPR_3|PF13812.2|1.3e+04,PPR_3|PF13812.2|6.6e-05,PPR_3|PF13812.2|0.026,PPR_3|PF13812.2|0.0048,PPR_3|PF13812.2|2.1e-06,PPR_3|PF13812.2|4.8e+02,MRP-S27|PF10037.5|3.1e-05,MRP-S27|PF10037.5|2.6,MRP-S27|PF10037.5|2.2 S_Transcript_211603:3-737(-)
ATGATCAGGAAGGGAATTCCTGCACATAGTTATACTGGTAATAGTTTGATCATGGGTTTTTGCAATGCTTGTTGCTTAGCATCTGCAGAGTGGGTTCTGTCTTTTTTGATCAACTACAAAGGTGGAACGGTTGATATCTTTCCTGATATTGTAAGCTTTAACACTTTGATTCATGGTTATTGCAAGGCTGGTCTGATGAATAATGCTCTTCAAGTAATGGAAGATATGAGGAAGATGGGTGTATCACCTGACATTATTACGTATAATATTCTAATTGATGGTTTCTGCAGAACTGGAGATTTTCTTGAGGCCAAGAATCTTATGACTAAGCTACTGGATTCGTATTTTGATAAAGATTCTTTTTCAGACCTAGAATTTAACCAGGGTGATGCAAAAGAAGCAAGTAGACCAATAGATTCAGATGTGCAACCAAATGTGACTACATACACCACTTTGATTGCTTCTTTCTGCAAACAACAAGCAATACAAGAGGGCCTGGATTTATATCAGGACATGGTTACTAGTGGAATCTTCCCTGATTTGATTACGTACAGCTCCATTATAACTGGCCTTTCCAGGAGTGGAAGGTTAGCAGAGGCACAGGCTGTTTTTATGGAAATGAAGCAAACTGGAATGAAACCTAATCATGTATCTTTCTCTGTTCTTATTGATTCATTTTTCAAAAATGGCTGCCAAATGGGAGCATATGCCTTTTTAAGTCAGGTGGTAGCGCAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_211603.p1 GENE.S_Transcript_211603~~S_Transcript_211603.p1 ORF type:3prime_partial len:246 (-),score=39.84,PPR_1|PF12854.3|1.9,PPR_1|PF12854.3|3e-13,PPR_1|PF12854.3|8e-11,PPR_1|PF12854.3|1.4e-06,PPR_1|PF12854.3|8.6e-09,PPR_1|PF12854.3|0.00027,PPR_2|PF13041.2|1.2,PPR_2|PF13041.2|1.8e-21,PPR_2|PF13041.2|1.1e-14,PPR_2|PF13041.2|1.4e-14,PPR|PF01535.16|9.9,PPR|PF01535.16|1.5e-09,PPR|PF01535.16|5.8e-06,PPR|PF01535.16|7.7e-05,PPR|PF01535.16|3.6e-06,PPR|PF01535.16|5.1,PPR_3|PF13812.2|1.3e+04,PPR_3|PF13812.2|6.6e-05,PPR_3|PF13812.2|0.026,PPR_3|PF13812.2|0.0048,PPR_3|PF13812.2|2.1e-06,PPR_3|PF13812.2|4.8e+02,MRP-S27|PF10037.5|3.1e-05,MRP-S27|PF10037.5|2.6,MRP-S27|PF10037.5|2.2 S_Transcript_211603:3-737(-)
MIRKGIPAHSYTGNSLIMGFCNACCLASAEWVLSFLINYKGGTVDIFPDIVSFNTLIHGYCKAGLMNNALQVMEDMRKMGVSPDIITYNILIDGFCRTGDFLEAKNLMTKLLDSYFDKDSFSDLEFNQGDAKEASRPIDSDVQPNVTTYTTLIASFCKQQAIQEGLDLYQDMVTSGIFPDLITYSSIITGLSRSGRLAEAQAVFMEMKQTGMKPNHVSFSVLIDSFFKNGCQMGAYAFLSQVVAQ

Click here to download the sequence:
Link to NCBI Protein BLAST