Transcript Information: S_Transcript_211944.p1


Annotated TAIR IDAT5G11950.1
Annotated Gene NamePutative lysine decarboxylase family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:3855072-3856815 | Forward length=216
E-Value6.6E-125
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 172.061688276082
Replicate 257.020725523075
Replicate 355.749275284674
Condition 2: 8 Hour
Replicate 136.418703098666
Replicate 232.791613759599
Replicate 327.64246904025
Condition 3: 24 Hour
Replicate 147.380455059508
Replicate 238.083482466191
Replicate 338.696835251685


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_211944.p1 GENE.S_Transcript_211944~~S_Transcript_211944.p1 ORF type:complete len:219 (+),score=66.32,Lysine_decarbox|PF03641.10|8.2e-44 S_Transcript_211944:64-720(+)
ATGGAAGAGAGTAATAATTATAGTACAAGTTACAAATTCAAAAAGGTTTGTGTTTTTTGTGGGAGCAATTCTGGTTATAGACAAGTCTTCAGTGATGCTGCCATTGATTTGGGCAATGAACTGGTAAAAAGGAAGATGGACTTGGTTTATGGAGGGGGAAGTATTGGGTTGATGGGTTTAATTTCCAGGAAAGTGTATGATGGAGGCTGTCATGTTCTGGGTGTCATTCCTAGAGCTCTTATGCCATATGAGATATCTGGAGAAACTGTTGGGGAAGTAAGAATTGTTGCTGACATGCATGAAAGAAAAGCTATCATGGCTCGAGAAGCTGAGGCTTTTATCGCTCTTCCTGGAGGATATGGTACGATGGAAGAGATGTTGGAGATGATTACATGGGCTCAGCTTGGAATTCACAAAAAGCCGGTGGGGCTTTTGAATGTTGATGGATATTATGATTGCTTGCTTCAACTATTTGACACTGGTGTGAAGGAAGGATTTATCAAACCAGCTGCTCGAAGTATAGTCGTTTCTGCCCCAAATGCAGAAGAGCTCTTGACCAAAATGGAGGAATTCACTCCTTCTCATCAACATGTTGCACCTCAAGAAAGCTGGCAAATGCAACAATTGGGTGAATATCCAAAGCAACAAAATGTGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_211944.p1 GENE.S_Transcript_211944~~S_Transcript_211944.p1 ORF type:complete len:219 (+),score=66.32,Lysine_decarbox|PF03641.10|8.2e-44 S_Transcript_211944:64-720(+)
MEESNNYSTSYKFKKVCVFCGSNSGYRQVFSDAAIDLGNELVKRKMDLVYGGGSIGLMGLISRKVYDGGCHVLGVIPRALMPYEISGETVGEVRIVADMHERKAIMAREAEAFIALPGGYGTMEEMLEMITWAQLGIHKKPVGLLNVDGYYDCLLQLFDTGVKEGFIKPAARSIVVSAPNAEELLTKMEEFTPSHQHVAPQESWQMQQLGEYPKQQNV*

Click here to download the sequence:
Link to NCBI Protein BLAST