Transcript Information: S_Transcript_211979.p1


Annotated TAIR IDAT1G10710.1
Annotated Gene Namepoor Homologous synapsis 1
Annotated Gene Symbol(s)PHS1
Annotation TypeHomolog
Chromosome Positionchr1:3558423-3561495 | Forward length=410
E-Value2E-33
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.79679644416708
Replicate 20.52845004928179
Replicate 30.44174218164313
Condition 2: 8 Hour
Replicate 10.70233321403731
Replicate 20.87076057579774
Replicate 30.70201893309819
Condition 3: 24 Hour
Replicate 10.39242305671726
Replicate 21.0856915725196
Replicate 30.22654530902799


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_211979.p1 GENE.S_Transcript_211979~~S_Transcript_211979.p1 ORF type:complete len:334 (+),score=63.29 S_Transcript_211979:202-1203(+)
ATGGCGGATTCGTCGGCGATGATGGAGAGCGGAACCGAGAAATCGATAATGGCAGTAAGAGAGCAATGGCGATGGCAGGTTCAATACTCTCGTTGCTTCACTTATCCTTTTAGTAGTTCTGGTGATCGGCTCTCTACTGGCACCGCCAATTCAGCTGTTCCGCCACTCTCTCCACAGAAGAAAAACATGTTCAGGCCGATTTGGATTTCGTCCTATGGATCGTCCACTCTTTCCATCCATCCTTCCGCTGATGGCTCCTCTTCGTCAGATTCTATCATCACCGTCTCTTTGCAAGGCTCAATCATCGAAGAGCACTTCATCGGCAAGCTGCACTTCACCTGGCCTCAGGTGTCATGTCTCTCAGGTTTTCCTGCTCGAGGTAGCCTTGTTGTCTTTGCAAGCTACATAGACAGTGCAGATGAGAAGCAAAAGTTTGCAATGCGGTTTTCAACAATTTCAGAAACAGAAGACTTTATAACTTCATTGGAGGACATCCTTTCCGATAAACATCCTAAAGGGCGTGCATCGGTTGATGCCATATCTGTAATATCTTCCGAGTCTGAGCTTGTTCCTCGAGCCATATCTTCCATATCCTCTGATCAGTCCGAGTTCGTTCCTCCAGCCATATCTGCCATATCCCCTGATCAGTCTGATTTCATTCCCCCATACAAACCTGAAATGCCAAGTGGGATGACTCTAAGTTGTACTTCTCCCTTGCCATCGAATGTGTGCTGTGAAGATCATCAGGAGTCACAGGCCCCCAATGGAGTGGCTGCTTCCGAAAACAATGCTGTAGCATTCCCTCCTAGTTTCACATCACTTGTGTCCAATTGCTCTGCTGAGACAGAACACGGTAGTTTAGCTCTTGCTCTTACTGACGGACCTAAGGAAGTTGACTTGAAAGCTCAAATTGCGAAATATATGCAAGATGCATCCTTCCTTGATATGGTGAGTAAAGTGAATGAGGTTATCACTGAGCTTGGAGAAGACTTTGTGCTGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_211979.p1 GENE.S_Transcript_211979~~S_Transcript_211979.p1 ORF type:complete len:334 (+),score=63.29 S_Transcript_211979:202-1203(+)
MADSSAMMESGTEKSIMAVREQWRWQVQYSRCFTYPFSSSGDRLSTGTANSAVPPLSPQKKNMFRPIWISSYGSSTLSIHPSADGSSSSDSIITVSLQGSIIEEHFIGKLHFTWPQVSCLSGFPARGSLVVFASYIDSADEKQKFAMRFSTISETEDFITSLEDILSDKHPKGRASVDAISVISSESELVPRAISSISSDQSEFVPPAISAISPDQSDFIPPYKPEMPSGMTLSCTSPLPSNVCCEDHQESQAPNGVAASENNAVAFPPSFTSLVSNCSAETEHGSLALALTDGPKEVDLKAQIAKYMQDASFLDMVSKVNEVITELGEDFVL*

Click here to download the sequence:
Link to NCBI Protein BLAST