Transcript Information: S_Transcript_211995.p1


Annotated TAIR IDAT5G18880.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:6300535-6301422 | Reverse length=295
E-Value0.001
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.13789243473447
Replicate 30.34580130156751
Condition 2: 8 Hour
Replicate 10.79970213689249
Replicate 20.69912026999146
Replicate 30.7993442851868
Condition 3: 24 Hour
Replicate 10.68265260908107
Replicate 20.42494646705651
Replicate 30.47291333259593


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_211995.p1 GENE.S_Transcript_211995~~S_Transcript_211995.p1 ORF type:complete len:160 (+),score=20.05,zf-RVT|PF13966.2|7.3e-10 S_Transcript_211995:1156-1635(+)
ATGGGGCTAGGTTCAATTCTTGGAGGATGTTTGGTGCGGGGAGGCTTCCCTTGCTTCTCGTTTTCCCCGCATCTTTCGTGTGTCCTCTATTCATATGCTCCTATTGCATTCTTTTTTGGGAGCAATGGTAGTTGGGACTTCCATTTGAGGAGGCCCCCTTTGGATTGGGAGTTGAACGAGCTGATAGCCCTTATTGCTACTTGGAACTTTATTCACCTCTCCCAAGGTGATGATTCTAGGGTATGGCAAGGGGACTCCTCAGGAGTCTTTTCCAGCAAATCCTTCCTCTGTCAGCTTAGCGTCACCTCCCTTACGTCCCCTTTTCCAGTGGCCAAGGTCATTTGGAAGTCTAAGGTCCCCCCTAAGGTTCGTGCTTTCACTTGGATAGTTGTTATTGGCAAAGTCAACACTCATGATGTGCTTCAAAGGCGTAGGCCTGATTTGTGTCTATCCCCGGATGTTTGTTTCATGTGCTCTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_211995.p1 GENE.S_Transcript_211995~~S_Transcript_211995.p1 ORF type:complete len:160 (+),score=20.05,zf-RVT|PF13966.2|7.3e-10 S_Transcript_211995:1156-1635(+)
MGLGSILGGCLVRGGFPCFSFSPHLSCVLYSYAPIAFFFGSNGSWDFHLRRPPLDWELNELIALIATWNFIHLSQGDDSRVWQGDSSGVFSSKSFLCQLSVTSLTSPFPVAKVIWKSKVPPKVRAFTWIVVIGKVNTHDVLQRRRPDLCLSPDVCFMCS*

Click here to download the sequence:
Link to NCBI Protein BLAST