Transcript Information: S_Transcript_212146.p1


Annotated TAIR IDAT4G33565.1
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:16136821-16137924 | Forward length=367
E-Value6.2E-47
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.8661555744181
Replicate 21.3452920461899
Replicate 31.8555191791427
Condition 2: 8 Hour
Replicate 11.8204601490235
Replicate 21.0913096897428
Replicate 31.8196455272545
Condition 3: 24 Hour
Replicate 11.7982068727014
Replicate 22.0729095953976
Replicate 30.99965419898326


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_212146.p1 GENE.S_Transcript_212146~~S_Transcript_212146.p1 ORF type:complete len:328 (+),score=7.62,zf-RING_2|PF13639.2|1.6e+04,zf-RING_2|PF13639.2|6.7e-14,zf-RING_11|PF17123.1|1.2e-11,zf-rbx1|PF12678.3|1.6e+03,zf-rbx1|PF12678.3|1.1e-09,zf-C3HC4|PF00097.21|2.3e+03,zf-C3HC4|PF00097.21|2.6e-07 S_Transcript_212146:76-984(+)
ATGGCGTCTTTCCAAAGAAAACTCCTCCCAAAGGAGGCACAAGACACAAACACCACTACTTCTAGTACTAGTAGTACAACAGTCAAAACATGTCTCTTCTTTTGTAGCTCTCAATCAAATCAAACTAATCCCACCTTTGTCTGTCCTGAGGCCTGTTTGGCAATCTGTCCCTCTGTTTGCCACTATGCCTTGGAAGCCTTCATCTTACCCCCTGAACCTTCTCCTCCTCCAAACAACCCCCAAAACCTCTCTCCTCTTTTAATCTCTATGCTTATCATTCTTGGGTCCGCTTTGTTTTTAATTACCTTCTATGTCCTCTACACAAAACTCTACTCCCACTTTTATAATTACAGCAATTCCCAAATAAGGTACAGAAGGAGAAGACCTTCAAATACTAATACTAATATTACTAATGATGAGGAACACGGGCCTGCGGCGGTCTTCCACCCAATCTGGTACATCCCAACCGTCGGACTCAACCCCAGCGTGATCAACTCCATCACGGTGTGCAAGTACGGGAGGAGAGAGAAAGACAGAGTACACGTGGAGGGCAGTGATTGCGCGGTTTGTTTAGCGGAGTTTCAACAAGGGGATCAACTCCGTGTTCTCCCTAAATGTAATCACGCTTTTCACATCCCATGTATTGACACCTGGCTTCGATCTCACACCAACTGCCCCCTTTGCCGGGCCCCAGTAGTCGTGGCCCCCCATGATCAAACGACTCAGAATTCATCATCAGAGGATCATAGCCCAGCTCAGAATTCATCATCGAGAAATAGTAATATGAGAAGATCAGCTTCAACGGATTGCGTAGAGAATAATAAAGGAATGCTGGTGGGGGTAGTTGTGGTGGTTGTTCAAGTCAATCTCAACGGTGGAGTCATCTGGAAAGAGGGGCGGCGAGTTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_212146.p1 GENE.S_Transcript_212146~~S_Transcript_212146.p1 ORF type:complete len:328 (+),score=7.62,zf-RING_2|PF13639.2|1.6e+04,zf-RING_2|PF13639.2|6.7e-14,zf-RING_11|PF17123.1|1.2e-11,zf-rbx1|PF12678.3|1.6e+03,zf-rbx1|PF12678.3|1.1e-09,zf-C3HC4|PF00097.21|2.3e+03,zf-C3HC4|PF00097.21|2.6e-07 S_Transcript_212146:76-984(+)
MASFQRKLLPKEAQDTNTTTSSTSSTTVKTCLFFCSSQSNQTNPTFVCPEACLAICPSVCHYALEAFILPPEPSPPPNNPQNLSPLLISMLIILGSALFLITFYVLYTKLYSHFYNYSNSQIRYRRRRPSNTNTNITNDEEHGPAAVFHPIWYIPTVGLNPSVINSITVCKYGRREKDRVHVEGSDCAVCLAEFQQGDQLRVLPKCNHAFHIPCIDTWLRSHTNCPLCRAPVVVAPHDQTTQNSSSEDHSPAQNSSSRNSNMRRSASTDCVENNKGMLVGVVVVVVQVNLNGGVIWKEGRRV*

Click here to download the sequence:
Link to NCBI Protein BLAST