Transcript Information: S_Transcript_212148.p1


Annotated TAIR IDAT1G20823.1
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:7238880-7239473 | Forward length=197
E-Value8.4E-20
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.73738794354404
Replicate 20.38901644056071
Replicate 30.65037356466098
Condition 2: 8 Hour
Replicate 11.5040577553645
Replicate 21.1833975350989
Replicate 31.4496924063841
Condition 3: 24 Hour
Replicate 10.77034853619224
Replicate 20.57087686590296
Replicate 31.2706319599555


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_212148.p1 GENE.S_Transcript_212148~~S_Transcript_212148.p1 ORF type:3prime_partial len:397 (+),score=10.53,zf-RING_2|PF13639.2|8e+03,zf-RING_2|PF13639.2|8.8e-14,zf-RING_11|PF17123.1|1.6e-11,zf-rbx1|PF12678.3|2.1e+03,zf-rbx1|PF12678.3|1.5e-09,zf-C3HC4|PF00097.21|3.3e+03,zf-C3HC4|PF00097.21|3.4e-07,zf-ANAPC11|PF12861.3|2.4e-05 S_Transcript_212148:76-1188(+)
ATGGCGTCTTTCCAAAGAAAACTCCTCCCAAAGGAGGCACAAGACACAAACACCACTACTTCTAGTACTAGTAGTACAACAGTCAAAACATGTCTCTTCTTTTGTAGCTCTCAATCAAATCAAACTAATCCCACCTTTGTCTGTCCTGAGGCCTGTTTGGCAATCTGTCCCTCTGTTTGCCACTATGCCTTGGAAGCCTTCATCTTACCCCCTGAACCTTCTCCTCCTCCAAACAACCCCCAAAACCTCTCTCCTCTTTTAATCTCTATGCTTATCATTCTTGGGTCCGCTTTGTTTTTAATTACCTTCTATGTCCTCTACACAAAACTCTACTCCCACTTTTATAATTACAGCAATTCCCAAATAAGGTACAGAAGGAGAAGACCTTCAAATACTAATACTAATATTACTAATGATGAGGAACACGGGCCTGCGGCGGTCTTCCACCCAATCTGGTACATCCCAACCGTCGGACTCAACCCCAGCGTGATCAACTCCATCACGGTGTGCAAGTACGGGAGGAGAGAGAAAGACAGAGTACACGTGGAGGGCAGTGATTGCGCGGTTTGTTTAGCGGAGTTTCAACAAGGGGATCAACTCCGTGTTCTCCCTAAATGTAATCACGCTTTTCACATCCCATGTATTGACACCTGGCTTCGATCTCACACCAACTGCCCCCTTTGCCGGGCCCCAGTAGTCGTGGCCCCACATGATCAAACGCCTCAGAATTCGTTATCAAGATTAGCATCATCAGAGGATCATAGCCCAGCTCAGAATTCATCATCGAGAAATAGTAATATGAGAAGATCAGCTTCAACGGATTGCGTAGAGAATAATAAAGGGAATGGTGGTGGAGGTAGTTGTGGTGGTTGTTCAAGTCAATCTCAACGGTGGAGTCATCTGGAAAGAGGGGCGGCGAGTTTAGTTAGCCGGTCACTGTCCTGCAGTGCTAACATTTTTTCTTCCAGGTACAACCACAATCATAATCATAATAATAATCATAATAATTCTAATTCGATCAATAATATTAATAATAATGATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAAT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_212148.p1 GENE.S_Transcript_212148~~S_Transcript_212148.p1 ORF type:3prime_partial len:397 (+),score=10.53,zf-RING_2|PF13639.2|8e+03,zf-RING_2|PF13639.2|8.8e-14,zf-RING_11|PF17123.1|1.6e-11,zf-rbx1|PF12678.3|2.1e+03,zf-rbx1|PF12678.3|1.5e-09,zf-C3HC4|PF00097.21|3.3e+03,zf-C3HC4|PF00097.21|3.4e-07,zf-ANAPC11|PF12861.3|2.4e-05 S_Transcript_212148:76-1188(+)
MASFQRKLLPKEAQDTNTTTSSTSSTTVKTCLFFCSSQSNQTNPTFVCPEACLAICPSVCHYALEAFILPPEPSPPPNNPQNLSPLLISMLIILGSALFLITFYVLYTKLYSHFYNYSNSQIRYRRRRPSNTNTNITNDEEHGPAAVFHPIWYIPTVGLNPSVINSITVCKYGRREKDRVHVEGSDCAVCLAEFQQGDQLRVLPKCNHAFHIPCIDTWLRSHTNCPLCRAPVVVAPHDQTPQNSLSRLASSEDHSPAQNSSSRNSNMRRSASTDCVENNKGNGGGGSCGGCSSQSQRWSHLERGAASLVSRSLSCSANIFSSRYNHNHNHNNNHNNSNSINNINNNDNNNNNNNNNNNNNNNNNNNNNNNN

Click here to download the sequence:
Link to NCBI Protein BLAST