Transcript Information: S_Transcript_212416.p1


Annotated TAIR IDAT1G12520.1
Annotated Gene Namecopper chaperone for SOD1
Annotated Gene Symbol(s)ATCCS, CCS
Annotation TypeHomolog
Chromosome Positionchr1:4267277-4268900 | Reverse length=320
E-Value6E-27
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.0170573720451
Replicate 22.529491796403
Replicate 31.5271055355848
Condition 2: 8 Hour
Replicate 12.9882712546301
Replicate 23.1349087265859
Replicate 33.1227037892648
Condition 3: 24 Hour
Replicate 12.365369549937
Replicate 22.8871097549487
Replicate 34.3375490378225


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_212416.p1 GENE.S_Transcript_212416~~S_Transcript_212416.p1 ORF type:5prime_partial len:157 (+),score=32.20,HMA|PF00403.22|1.2e-10 S_Transcript_212416:2-472(+)
AACAAAGACGACGGCGATTGTTTTGTTGCCTTAGTAGCTATTCCCGCTGCTTTTGCTGCTGCTTCTCTCTCTAATTCCAACCCTTCTTCTTCAACTTCTCCGTCATCGCCAATCTTAAAATATCAGGATTTGCGTTTTCTCTCTCCTAAATCGTCATTTCTGAGTTCAGGAAGTAGTACTAGTAGCAGATTCGGACTTGCTAAGAGTTTCTGCTCTCCACCTTCTCCCGTTCTAATGGACTCTCCCTTACCTTCCTCTCAGGAGAATTCTTCGTTGCCGGAGTTGATGACGGAATTCATGGTCGATATCAAGTGTGAAGCGTGTGTCAATGCCATCAAGAGTAAATTACAGATGGTAGAAGGGGTCAAGAATGTGGAAGTGGACTTGAGTAATCAAGTAGTTAGGATTCTTGGGTCTTCACCTCTTAAATCCATGGAAGAGGCTTTGGAACAAACAGGTCATAAAGCTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_212416.p1 GENE.S_Transcript_212416~~S_Transcript_212416.p1 ORF type:5prime_partial len:157 (+),score=32.20,HMA|PF00403.22|1.2e-10 S_Transcript_212416:2-472(+)
NKDDGDCFVALVAIPAAFAAASLSNSNPSSSTSPSSPILKYQDLRFLSPKSSFLSSGSSTSSRFGLAKSFCSPPSPVLMDSPLPSSQENSSLPELMTEFMVDIKCEACVNAIKSKLQMVEGVKNVEVDLSNQVVRILGSSPLKSMEEALEQTGHKA*

Click here to download the sequence:
Link to NCBI Protein BLAST