Transcript Information: S_Transcript_21247.p1


Annotated TAIR IDAT3G52270.1
Annotated Gene NameTranscription initiation factor IIF, beta subunit
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:19387180-19388902 | Reverse length=269
E-Value1E-41
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 118.504352421336
Replicate 212.065588039266
Replicate 317.290065078375
Condition 2: 8 Hour
Replicate 124.99069177789
Replicate 229.363051339641
Replicate 323.480738377362
Condition 3: 24 Hour
Replicate 16.3145366339999
Replicate 216.112553542559
Replicate 313.202163868303


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_21247.p1 GENE.S_Transcript_21247~~S_Transcript_21247.p1 ORF type:complete len:128 (+),score=25.15,TFIIF_beta|PF02270.11|4.4e-20 S_Transcript_21247:1334-1717(+)
ATGCATCTATTGCTCAAGTATATGTTTTATCTGTCTTCTACTGATATGCTAAATGCAACACAGGTAATTGGCAGTGACAGGCCCATAATACCCATGCCAGGAATCATTCATGTGCAGGAAAGGAGAAAGCCAGTTGTGAAAGCATCAGAGACTAAAAGAACAAGAAGGGATCGTGGAGAGATGGAAGAGATTATGTTAAAACTTTTTGAACAGCAATCTAACTGGACACTGAAAGAGCTGATCCACAAGACAGATCAACCTGAGCAATTTATGAAAGATATACTGAAAGACCTTTGTGTCTACAACAACAAGGGAGCTAATCAAGGTTCCTATGAACTGAAGCCTGAATACAAGAGAACTGTTGAAGACCCAAGCGGTTCATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_21247.p1 GENE.S_Transcript_21247~~S_Transcript_21247.p1 ORF type:complete len:128 (+),score=25.15,TFIIF_beta|PF02270.11|4.4e-20 S_Transcript_21247:1334-1717(+)
MHLLLKYMFYLSSTDMLNATQVIGSDRPIIPMPGIIHVQERRKPVVKASETKRTRRDRGEMEEIMLKLFEQQSNWTLKELIHKTDQPEQFMKDILKDLCVYNNKGANQGSYELKPEYKRTVEDPSGS*

Click here to download the sequence:
Link to NCBI Protein BLAST