Transcript Information: S_Transcript_21249.p1


Annotated TAIR IDAT3G52270.1
Annotated Gene NameTranscription initiation factor IIF, beta subunit
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:19387180-19388902 | Reverse length=269
E-Value5.6E-60
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.7482993512162
Replicate 25.4754368244927
Replicate 37.1347811126338
Condition 2: 8 Hour
Replicate 120.080112050439
Replicate 213.880344046546
Replicate 321.315847604981
Condition 3: 24 Hour
Replicate 16.856423285369
Replicate 21.4888635342126
Replicate 32.9456402224953


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_21249.p1 GENE.S_Transcript_21249~~S_Transcript_21249.p1 ORF type:complete len:137 (+),score=26.67,TFIIF_beta|PF02270.11|2.1e-22 S_Transcript_21249:1201-1611(+)
ATGAGGCCTCACAAAGAAGCCATTGAGAGTTATGGGCAACTTTGCCGTGAGCGAACCAAAAAATACATGACGAAGAGTAGACAGATTCAGGTAATTGGCAGTGACAGGCCCATAATACCCATGCCAGGAATCATTCATGTGCAGGAAAGGAGAAAGCCAGTTGTGAAAGCATCAGAGACTAAAAGAACAAGAAGGGATCGTGGAGAGATGGAAGAGATTATGTTAAAACTTTTTGAACAGCAATCTAACTGGACACTGAAAGAGCTGATCCACAAGACAGATCAACCTGAGCAATTTATGAAAGATATACTGAAAGACCTTTGTGTCTACAACAACAAGGGAGCTAATCAAGGTTCCTATGAACTGAAGCCTGAATACAAGAGAACTGTTGAAGACCCAAGCGGTTCATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_21249.p1 GENE.S_Transcript_21249~~S_Transcript_21249.p1 ORF type:complete len:137 (+),score=26.67,TFIIF_beta|PF02270.11|2.1e-22 S_Transcript_21249:1201-1611(+)
MRPHKEAIESYGQLCRERTKKYMTKSRQIQVIGSDRPIIPMPGIIHVQERRKPVVKASETKRTRRDRGEMEEIMLKLFEQQSNWTLKELIHKTDQPEQFMKDILKDLCVYNNKGANQGSYELKPEYKRTVEDPSGS*

Click here to download the sequence:
Link to NCBI Protein BLAST