Transcript Information: S_Transcript_21252.p1


Annotated TAIR IDAT3G52270.1
Annotated Gene NameTranscription initiation factor IIF, beta subunit
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:19387180-19388902 | Reverse length=269
E-Value1E-53
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.7982282689134
Replicate 210.672233088286
Replicate 38.7495771187314
Condition 2: 8 Hour
Replicate 123.507523279816
Replicate 227.158383697529
Replicate 324.191008444723
Condition 3: 24 Hour
Replicate 18.8395575054963
Replicate 28.8546984763404
Replicate 311.027312437586


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_21252.p1 GENE.S_Transcript_21252~~S_Transcript_21252.p1 ORF type:3prime_partial len:215 (+),score=45.40,TFIIF_beta|PF02270.11|3e-07,TFIIF_beta|PF02270.11|9.8e-12 S_Transcript_21252:171-812(+)
ATGGAAGGATACGTAGATACAAGCAAGGCAGAGAGAGCTGTTTGGCTTATGAAATGCCCTGCTGTTGTTTCTCGTTCTCTCCAAAAAAACTCTTCTTCTTCCAACAACAATGGCAATGGCAATGTCAATGATCTTCCACCTGTTGCTAAAGTCATCGTTTCCATTGACCCACTTGGCCCTTCCAATGACAACGGCTCCACTCAGTTCACCATGGAATTGACTGGCACTCAATTGGAAAATATACCCAAGGTTTACTCAATGGATATGTCCACAGATTTTGTCCCGATGTCTGTCTTTTCTGAATCTCAAGGGAAGATATCTGTAGAAGGGAAAATTTTAAATAAATTTGACATGAGGCCTCACAAAGAAGCCATTGAGAGTTATGGGCAACTTTGCCGTGAGCGAACCAAAAAATACATGACGAAGAGTAGACAGATTCAGGTAATTGGCAGTGACAGGCCCATAATACCCATGCCAGGAATCATTCATGTGCAGGAAAGGAGAAAGCCAGTTGTGAAAGCATCAGAGACTAAAAGAACAAGAAGGGATCGTGGAGAGATGGAAGAGATTATGTTAAAACTTTTTGAACAGCAATCTAACTGGACACTGAAAGAGCTGATCCACAAGACAGATCAACCTGAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_21252.p1 GENE.S_Transcript_21252~~S_Transcript_21252.p1 ORF type:3prime_partial len:215 (+),score=45.40,TFIIF_beta|PF02270.11|3e-07,TFIIF_beta|PF02270.11|9.8e-12 S_Transcript_21252:171-812(+)
MEGYVDTSKAERAVWLMKCPAVVSRSLQKNSSSSNNNGNGNVNDLPPVAKVIVSIDPLGPSNDNGSTQFTMELTGTQLENIPKVYSMDMSTDFVPMSVFSESQGKISVEGKILNKFDMRPHKEAIESYGQLCRERTKKYMTKSRQIQVIGSDRPIIPMPGIIHVQERRKPVVKASETKRTRRDRGEMEEIMLKLFEQQSNWTLKELIHKTDQPE

Click here to download the sequence:
Link to NCBI Protein BLAST