Transcript Information: S_Transcript_212620.p1


Annotated TAIR IDAT2G06000.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr2:2328000-2329610 | Reverse length=536
E-Value3E-42
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.3578061854684
Replicate 21.2382177812891
Replicate 31.3173382916857
Condition 2: 8 Hour
Replicate 11.1968331300432
Replicate 23.1959783771038
Replicate 31.522560543213
Condition 3: 24 Hour
Replicate 11.5603488207567
Replicate 22.3126338343212
Replicate 32.444994100496


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_212620.p1 GENE.S_Transcript_212620~~S_Transcript_212620.p1 ORF type:internal len:196 (-),score=32.26,PPR_2|PF13041.2|5.6e-10,PPR_2|PF13041.2|5.3e-09,PPR_2|PF13041.2|4.1e-19,PPR_2|PF13041.2|1.4e-09,PPR_2|PF13041.2|5.4e-20,PPR_2|PF13041.2|0.084,PPR_1|PF12854.3|0.32,PPR_1|PF12854.3|2.4e-12,PPR_1|PF12854.3|1.7e-13,PPR_1|PF12854.3|5.2e-06,PPR_1|PF12854.3|3.7e-11,PPR_1|PF12854.3|2.1e-10,PPR|PF01535.16|24,PPR|PF01535.16|1.7e-05,PPR|PF01535.16|1.7e-11,PPR|PF01535.16|1.6e-05,PPR|PF01535.16|2.3e-09,PPR|PF01535.16|0.0002,PPR_3|PF13812.2|1.1e+03,PPR_3|PF13812.2|0.016,PPR_3|PF13812.2|3.8e-08,PPR_3|PF13812.2|3.2,PPR_3|PF13812.2|0.00062,PPR_3|PF13812.2|1.8,MRP-S27|PF10037.5|0.00066,MRP-S27|PF10037.5|0.31,MRP-S27|PF10037.5|0.019 S_Transcript_212620:1-585(-)
GCCGGCCAGGTTAATGAGGCTTTTCGGTTTTTCGAGGGTATGACTAATCATTATGGTTTATTTCCTGATGTTGTTACCTACAATACCTTGATTAATGGGTTGTGTAGGGTTCATGAGGTTAGTAAAGCTTGTGAGTTGCTTATGGAGGTTGGATCGAGGGATGATGTTTCGGCTAATGTTGTGACTTATACGTCGATCATTTCGTGTCTTTGCAAGAAGGGTAGGATGGATGAGGCGACGTCTCTTTTTAAGGAAATGATTAGTGCTGGAATTAGACCTACTATTGTTACTTTTAATGTGCTTATTGATGGGTTTGGCAAGGTTGGCGACTTGGGTTCTATGTTGACTATGTATGAGAAAATGCTTTTCATGGGTTTTAATCCCGATGTTGTTACGTTTACCTCTCGTATTAGTGGTTATTGTCGAGTTGGATTAGTTGAAGAGGGTTTGAAGCTTTTGGAGGAAATGATTCGTAGGGGCTTGCCTCCAAATGAGTATACATTTTCTATTCTGATTATTGCTTTGTGCAAGGAGAATAGAGTGAATGAGGCCTGTGAACTTTTGAATAATTTGATTTCGAGAAAT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_212620.p1 GENE.S_Transcript_212620~~S_Transcript_212620.p1 ORF type:internal len:196 (-),score=32.26,PPR_2|PF13041.2|5.6e-10,PPR_2|PF13041.2|5.3e-09,PPR_2|PF13041.2|4.1e-19,PPR_2|PF13041.2|1.4e-09,PPR_2|PF13041.2|5.4e-20,PPR_2|PF13041.2|0.084,PPR_1|PF12854.3|0.32,PPR_1|PF12854.3|2.4e-12,PPR_1|PF12854.3|1.7e-13,PPR_1|PF12854.3|5.2e-06,PPR_1|PF12854.3|3.7e-11,PPR_1|PF12854.3|2.1e-10,PPR|PF01535.16|24,PPR|PF01535.16|1.7e-05,PPR|PF01535.16|1.7e-11,PPR|PF01535.16|1.6e-05,PPR|PF01535.16|2.3e-09,PPR|PF01535.16|0.0002,PPR_3|PF13812.2|1.1e+03,PPR_3|PF13812.2|0.016,PPR_3|PF13812.2|3.8e-08,PPR_3|PF13812.2|3.2,PPR_3|PF13812.2|0.00062,PPR_3|PF13812.2|1.8,MRP-S27|PF10037.5|0.00066,MRP-S27|PF10037.5|0.31,MRP-S27|PF10037.5|0.019 S_Transcript_212620:1-585(-)
AGQVNEAFRFFEGMTNHYGLFPDVVTYNTLINGLCRVHEVSKACELLMEVGSRDDVSANVVTYTSIISCLCKKGRMDEATSLFKEMISAGIRPTIVTFNVLIDGFGKVGDLGSMLTMYEKMLFMGFNPDVVTFTSRISGYCRVGLVEEGLKLLEEMIRRGLPPNEYTFSILIIALCKENRVNEACELLNNLISRN

Click here to download the sequence:
Link to NCBI Protein BLAST