Transcript Information: S_Transcript_212786.p1


Annotated TAIR IDAT1G76640.1
Annotated Gene NameCalcium-binding EF-hand family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:28765324-28765803 | Reverse length=159
E-Value5.2E-40
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.6998696905256
Replicate 23.9435904040002
Replicate 33.6529090793605
Condition 2: 8 Hour
Replicate 11.1332333018766
Replicate 20.5403828173847
Replicate 31.2357013104337
Condition 3: 24 Hour
Replicate 12.9548634673268
Replicate 22.0802532364763
Replicate 31.9495300023278


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_212786.p1 GENE.S_Transcript_212786~~S_Transcript_212786.p1 ORF type:complete len:207 (+),score=35.06,EF-hand_8|PF13833.2|0.24,EF-hand_8|PF13833.2|1.2e-10,EF-hand_8|PF13833.2|3.6e-11,EF-hand_1|PF00036.28|2.1e-07,EF-hand_1|PF00036.28|0.032,EF-hand_1|PF00036.28|2.3e+03,EF-hand_1|PF00036.28|5.9e+02,EF-hand_1|PF00036.28|4.5e-08,EF-hand_7|PF13499.2|5.6e-10,EF-hand_7|PF13499.2|0.032,EF-hand_7|PF13499.2|1.1e-06,EF-hand_5|PF13202.2|1.3e-07,EF-hand_5|PF13202.2|0.073,EF-hand_5|PF13202.2|2.4e+03,EF-hand_5|PF13202.2|3.4e-05,EF-hand_6|PF13405.2|1.9e-06,EF-hand_6|PF13405.2|0.37,EF-hand_6|PF13405.2|26,EF-hand_6|PF13405.2|0.0055 S_Transcript_212786:137-757(+)
ATGGTGCAGTCGCCCAAGACGGGATTTAGCAGTTTCTGCAAGAAACTAATTCCCAAAAGGAAGGAGAGGATGCTGGAGGTGATGGTGGAAAAGCCGGCCTATTCGTTGTCAGCAACATCAGTGTCATCGTCACCGTGCTCGCCATGGTCGTCATCGGATATTTCAGAGGAGAGAGACTACAGCGGGGAGATAGAGAGGGTGTTCAGGTACATAGACGAGGACGGTGACGGGAAGATATCACCATCAGAGCTCCGGCGGTGCGTGAAGGCGGTAGGAGTACAGAAGCTGACGGCGGAGGAGGCTGAGGCGGCGGTTGAGAGCTCGGATACCGACGGCGATGGGATGCTGAGTTTGGCGGATTTCGAGAGGCTTATGGGTGGTGATGGGGTCACTGAGGAGGAGAAAAAAGAAGAGCTCAAAACCGCGTTTTCAATGTACAGTGAAACAAACAAGAAGAATGGGAATGGTGGTGGTATCATAACGCCTAAGAGTTTGAAGAGAATGCTGAGTCGACTCGGCGAGTCTAAGTCTATACAGGATTGTAAAGCTATGATTCGGGTTTATGACCTTAATGGGGATGGGGTTCTTAGCTTTGACGAGTTTGTTACCATGATGGGTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_212786.p1 GENE.S_Transcript_212786~~S_Transcript_212786.p1 ORF type:complete len:207 (+),score=35.06,EF-hand_8|PF13833.2|0.24,EF-hand_8|PF13833.2|1.2e-10,EF-hand_8|PF13833.2|3.6e-11,EF-hand_1|PF00036.28|2.1e-07,EF-hand_1|PF00036.28|0.032,EF-hand_1|PF00036.28|2.3e+03,EF-hand_1|PF00036.28|5.9e+02,EF-hand_1|PF00036.28|4.5e-08,EF-hand_7|PF13499.2|5.6e-10,EF-hand_7|PF13499.2|0.032,EF-hand_7|PF13499.2|1.1e-06,EF-hand_5|PF13202.2|1.3e-07,EF-hand_5|PF13202.2|0.073,EF-hand_5|PF13202.2|2.4e+03,EF-hand_5|PF13202.2|3.4e-05,EF-hand_6|PF13405.2|1.9e-06,EF-hand_6|PF13405.2|0.37,EF-hand_6|PF13405.2|26,EF-hand_6|PF13405.2|0.0055 S_Transcript_212786:137-757(+)
MVQSPKTGFSSFCKKLIPKRKERMLEVMVEKPAYSLSATSVSSSPCSPWSSSDISEERDYSGEIERVFRYIDEDGDGKISPSELRRCVKAVGVQKLTAEEAEAAVESSDTDGDGMLSLADFERLMGGDGVTEEEKKEELKTAFSMYSETNKKNGNGGGIITPKSLKRMLSRLGESKSIQDCKAMIRVYDLNGDGVLSFDEFVTMMG*

Click here to download the sequence:
Link to NCBI Protein BLAST