Transcript Information: S_Transcript_21279.p1


Annotated TAIR IDAT3G55060.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G39300.2); Has 61765 Blast hits to 33720 proteins in 2065 species: Archae - 846; Bacteria - 6964; Metazoa - 31967; Fungi - 5247; Plants - 3104; Viruses - 205; Other Eukaryotes - 13432 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:20403189-20406222 | Reverse length=896
E-Value5E-93
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 111.881666613166
Replicate 210.69104321571
Replicate 39.238103736976
Condition 2: 8 Hour
Replicate 19.0565178479294
Replicate 210.150566533451
Replicate 38.8977222307545
Condition 3: 24 Hour
Replicate 111.973057738946
Replicate 210.488696827529
Replicate 312.817009861039


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_21279.p1 GENE.S_Transcript_21279~~S_Transcript_21279.p1 ORF type:complete len:551 (+),score=125.50 S_Transcript_21279:3335-4987(+)
ATGGAGCTTGCACAAGAAAGGTCTCAGAAGGTTAGAAACCTACTTGAAGAGGAAACGAATTTGGTGCTTGAAATCTCCGAACAGATACAGAGCCGAATTGCTGAAAGGGCTGCTGCTAAACAAGCTGTTTCGCCAGTGAAAGAGGAGATGAAATCAATGATTGTGAAACTCGAAAGGCAGAAGGATGATTGGAAATTCAAGCTTAGAGAATTTCAGTCAGAAGAGAATATGTTGAGGAATCGAATACGAGAACATGCAGACCAAAATGTGTCTCTTCAAAAGGAGGTCTCTTCTTTCCACAACAAGGAAGAATATTATACTCATAGGCTATCATACGTGGAGGTGCAACTCAAGGACTTAAAGTCGAAAATGGATGTAACTAGATCAGAGAATGACAATCTGCAGAAAAAGCTTTCTGAAGTTCACGATCAGCTGAAGGCTGCCAAAGAAGCTCAGTCTTGCTTGGAGACAAGTTACAAAGGGAAGGAGAAGGAAAACACGGATTTAGTAAAAGCAGTGGCAAGATTGCAAGGAACCTGCAGTGAACAAGAAAGAACGATTGATGGATTATGTCAATGTTTAAACATTGAGATTGAGAAGCGACAGAATTCAAGTAAAGTCGAGAACCTGACACATAAGTTGCAGATGGAACAGTTGCGGCTGTCAGGGGTTGAACAGGTTCTGAGAAGACAGTTAGAAACTTGTAATGTTGAATCTGAGTCTCTTAGACATGAAAATATCTACTTGTTAGAGCGCTTACAAGCCACTGGGAAATTAAGTGGCCTGTCAGGAACCTCGGCTCTGAAGCTGGAACAGGAGCTCGTATCTTGTGTTCAGGTCCTGCAAAACAAAGGGTTGTCACTTGTAAATGAGAGTATTCGGATGAGTGCAAAGTTGCTCAGGATTATCAAAAGCAAGATTAAAAGTGAGGGTTTCCTAGAAGAACACACTCTCATTGAGTATGATATGAAAGTTCAGGGGTTTAAGCAAGGTGCAGAAGAGCTGACGAGAAGTTTGGGAAAAGCTGCATCCGTTTTGAATGAGAAAACCAAACCAGCAAATTACGAGCTCATTTTGTCTGATAAGGAGAATGGAAGATTTCAAAATTTGACTAGTATGATTTCAGAGGACGATTTGAAGTCTGAGTTGAAGGCAGAGATCTTATTGACGAGCATACTTAAAGATAAACTGTATTCTAAAGAGACTGAAATTGAGAGGCTACAGAACGAATTAGCTCGAGCAGTAAGGAACCATGACGTGATTAAAAGTGAGATGCAGAATGCTTTTGATACTGTTTCTTGTGTGAATCACAAGATGAAGAATCTCGAGCTTCAGATTATCAAGAAGGATGGAACTATCAACCAACTTCAAAGTGAGGAACGCTTGCACGGAGAGGAGCTTTCTAACACTAGAGGAATCCTATCGAAAGTTACTCAAGAAAGAGACATTATGTGGGAGGAGGTGAAGCAGTACAGTGAGAAAAACATGCTATTGAATCGCGAAGTTAACTCAATGAAGAAGAAGATAGAGGCCCTCGAAGAAGATACCCTCCTCAAGGATGGTCAGATCTCAATTTTGAAAGACAGCCTTACTAATGCTAGATCATTTGATGTTCTTTTCGGATCCGAACATGGTGATAGTTTTAAGCTCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_21279.p1 GENE.S_Transcript_21279~~S_Transcript_21279.p1 ORF type:complete len:551 (+),score=125.50 S_Transcript_21279:3335-4987(+)
MELAQERSQKVRNLLEEETNLVLEISEQIQSRIAERAAAKQAVSPVKEEMKSMIVKLERQKDDWKFKLREFQSEENMLRNRIREHADQNVSLQKEVSSFHNKEEYYTHRLSYVEVQLKDLKSKMDVTRSENDNLQKKLSEVHDQLKAAKEAQSCLETSYKGKEKENTDLVKAVARLQGTCSEQERTIDGLCQCLNIEIEKRQNSSKVENLTHKLQMEQLRLSGVEQVLRRQLETCNVESESLRHENIYLLERLQATGKLSGLSGTSALKLEQELVSCVQVLQNKGLSLVNESIRMSAKLLRIIKSKIKSEGFLEEHTLIEYDMKVQGFKQGAEELTRSLGKAASVLNEKTKPANYELILSDKENGRFQNLTSMISEDDLKSELKAEILLTSILKDKLYSKETEIERLQNELARAVRNHDVIKSEMQNAFDTVSCVNHKMKNLELQIIKKDGTINQLQSEERLHGEELSNTRGILSKVTQERDIMWEEVKQYSEKNMLLNREVNSMKKKIEALEEDTLLKDGQISILKDSLTNARSFDVLFGSEHGDSFKL*

Click here to download the sequence:
Link to NCBI Protein BLAST