Transcript Information: S_Transcript_212847.p1


Annotated TAIR IDAT3G63520.1
Annotated Gene Namecarotenoid cleavage dioxygenase 1
Annotated Gene Symbol(s)CCD1, ATCCD1, ATNCED1, NCED1
Annotation TypeOrtholog
Chromosome Positionchr3:23452940-23455896 | Forward length=538
E-Value2.3E-163
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 19.1220664611153
Replicate 212.696510971777
Replicate 314.904978532973
Condition 2: 8 Hour
Replicate 18.7849878350453
Replicate 27.0351725282159
Replicate 39.5854283255105
Condition 3: 24 Hour
Replicate 120.196213038474
Replicate 224.160478378559
Replicate 319.907965866931


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_212847.p1 GENE.S_Transcript_212847~~S_Transcript_212847.p1 ORF type:internal len:318 (-),score=42.93,RPE65|PF03055.11|3.8e-60 S_Transcript_212847:3-953(-)
CTGAGATTTAATTTCTTCTGTTTATGCTTTGATGTATCTTTCTGTTGTACTTCATCTTTTAGTGCTTTGTTCATTAGATTGAAGTGTGTACTTTGTTGGAGGAACTTATATCACACTTTTGGACAACAGCTTGTCAAGATACTAAGCTCTTACTTTTTTGTTCACACAGATGTTCTTCGTGTATTGGAAGATGGAGATCTGCAAACCCTTGGAATGCTGGACTATGATAAGAGGTTGGCCCACTCCTTCACAGCTCATCCAAAAGTTGACCCATTCACAGGAGAGATGTTCACTTTTGGATACTCCCACTCTCCACCATATGTTACATATAGAGTGATATCAAAGGATGGTTACATGCACGATCCAGTACCTATAACCATACCAGCACCTGTCATGATGCACGATTTCGCCATAACTGAAAATTATGCAATTTTCATGGATCTTCCATTATACTTCAGACCTAAGGAAATGGTCAAGGAAAAAAAACTAATTTTCAGTTTTGACTCGACCAAAAAGTCCCGATTTGGTGTACTACCTCGATATGCGAAGAATGAGAGTCTAATCAAATGGTTTGAGCTTCCAAATTGCTTCATATTCCATAATGCCAATGCATGGGAGGAAGGAGATGAGATTGTTTTAATCACCTGTCGCCTTGAGAATCCAGATTTAGATATGATCAGTGGAGGTGTCAAAGACAAGCTTGAAAATTTCGCAAATGAGCTGTATGAAATGAGATTCAACATGAAATCTGGTCTTGCTTCTCAAAGAAAACTATCTGGATCTGCTGTGGACTTCCCTAGAATCAATGAAAACTACACTGGAAGGAAGCAGAGATATGTCTATGGTACTATCTTGGACAGCATAGCCAAAGTACAAGGAATAGTCAAATGTGACTTACATGCTGAACCTGATGCCAGCCAAACAAAGATTGAGGTGGGAGGCACCGTGCAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_212847.p1 GENE.S_Transcript_212847~~S_Transcript_212847.p1 ORF type:internal len:318 (-),score=42.93,RPE65|PF03055.11|3.8e-60 S_Transcript_212847:3-953(-)
LRFNFFCLCFDVSFCCTSSFSALFIRLKCVLCWRNLYHTFGQQLVKILSSYFFVHTDVLRVLEDGDLQTLGMLDYDKRLAHSFTAHPKVDPFTGEMFTFGYSHSPPYVTYRVISKDGYMHDPVPITIPAPVMMHDFAITENYAIFMDLPLYFRPKEMVKEKKLIFSFDSTKKSRFGVLPRYAKNESLIKWFELPNCFIFHNANAWEEGDEIVLITCRLENPDLDMISGGVKDKLENFANELYEMRFNMKSGLASQRKLSGSAVDFPRINENYTGRKQRYVYGTILDSIAKVQGIVKCDLHAEPDASQTKIEVGGTVQ

Click here to download the sequence:
Link to NCBI Protein BLAST