Transcript Information: S_Transcript_212849.p1


Annotated TAIR IDAT3G63520.1
Annotated Gene Namecarotenoid cleavage dioxygenase 1
Annotated Gene Symbol(s)CCD1, ATCCD1, ATNCED1, NCED1
Annotation TypeOrtholog
Chromosome Positionchr3:23452940-23455896 | Forward length=538
E-Value3.1E-43
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.289247343674
Replicate 20.49579302376438
Replicate 31.4505522762382
Condition 2: 8 Hour
Replicate 10.4792222543176
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 12.2090331619702
Replicate 20.50929913654713
Replicate 31.983756301526


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_212849.p1 GENE.S_Transcript_212849~~S_Transcript_212849.p1 ORF type:5prime_partial len:89 (-),score=13.41,RPE65|PF03055.11|1.4e-12 S_Transcript_212849:42-308(-)
CTGAGAGCAAAAATGAAAGTACTGGATGTCTCATATGGCACGGGGACAGCTAACACTGCTCTTATATATCACCATGGAAAACTTCTGGCACTGTCAGAGGGAGACAAACCTTATGTTCTTCGTGTATTGGAAGATGGAGATCTGCAAACCCTTGGAATGCTGGACTATGATAAGAGGTTGGCCCACTCCTTCACAGCTCATCCAAAAGTTGACCCATTCACAGGTCTGAGTTTAGATATTCATTGTATGGTTATACACTGTGCTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_212849.p1 GENE.S_Transcript_212849~~S_Transcript_212849.p1 ORF type:5prime_partial len:89 (-),score=13.41,RPE65|PF03055.11|1.4e-12 S_Transcript_212849:42-308(-)
LRAKMKVLDVSYGTGTANTALIYHHGKLLALSEGDKPYVLRVLEDGDLQTLGMLDYDKRLAHSFTAHPKVDPFTGLSLDIHCMVIHCA*

Click here to download the sequence:
Link to NCBI Protein BLAST