Transcript Information: S_Transcript_212854.p1


Annotated TAIR IDAT3G63520.1
Annotated Gene Namecarotenoid cleavage dioxygenase 1
Annotated Gene Symbol(s)CCD1, ATCCD1, ATNCED1, NCED1
Annotation TypeOrtholog
Chromosome Positionchr3:23452940-23455896 | Forward length=538
E-Value5.2E-83
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 139.919501852771
Replicate 251.782664902638
Replicate 351.531174351237
Condition 2: 8 Hour
Replicate 138.134815625932
Replicate 233.689372069235
Replicate 334.857680201087
Condition 3: 24 Hour
Replicate 166.434145674336
Replicate 264.125255107195
Replicate 353.114658217833


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_212854.p1 GENE.S_Transcript_212854~~S_Transcript_212854.p1 ORF type:internal len:170 (-),score=47.32,RPE65|PF03055.11|1e-23 S_Transcript_212854:3-509(-)
GAAGAAGAAGCAAAGAAGCTGAAAGAGGAGGAGATGAGTGCTGAAGGCCAAGGGAAGGGCAATAATGGAATTGTGGAAGTGAAGCCACAACCAAACAAAGGGTTAACTTCAAAAGCAATAGACTTGTTTGAGAAACTCATAGTCAAGTTAATATATGATTCTTCTAATCCCCATCACTGGCTTTCTGGTAACTTCGCTCCTGTTACTACAGAAACCCCTCCTGCCTCCAATTTGACTGTGCACGGCCATCTCCCTGAATGCTTGAATGGGGAGTTTGTTAGGGTTGGCCCCAACCCAAAGTTTGCTCCTGTTGCTGGATATCACTGGTTTGATGGAGATGGCATGATACACGGAATGCGGATTAAAAATGGGAAAGCAACATATGTCTCCCGTTATGTTAGAACATCAAGGATGAAACAAGAAGAGTTCTTTGGAGGAGCGAAATTTATGAAGATTGGAGATCTCAAAGGGCTATTTGGGTTACTTATGGTTAATCTGCAAATGCTG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_212854.p1 GENE.S_Transcript_212854~~S_Transcript_212854.p1 ORF type:internal len:170 (-),score=47.32,RPE65|PF03055.11|1e-23 S_Transcript_212854:3-509(-)
EEEAKKLKEEEMSAEGQGKGNNGIVEVKPQPNKGLTSKAIDLFEKLIVKLIYDSSNPHHWLSGNFAPVTTETPPASNLTVHGHLPECLNGEFVRVGPNPKFAPVAGYHWFDGDGMIHGMRIKNGKATYVSRYVRTSRMKQEEFFGGAKFMKIGDLKGLFGLLMVNLQML

Click here to download the sequence:
Link to NCBI Protein BLAST