Transcript Information: S_Transcript_212907.p1


Annotated TAIR IDAT5G62740.1
Annotated Gene NameSPFH/Band 7/PHB domain-containing membrane-associated protein family
Annotated Gene Symbol(s)HIR1, ATHIR1
Annotation TypeOrtholog
Chromosome Positionchr5:25201320-25202535 | Forward length=286
E-Value1.8E-90
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.7059616176398
Replicate 20.70714069094599
Replicate 30.70933600321541
Condition 2: 8 Hour
Replicate 10.41010365994486
Replicate 21.2906835753688
Replicate 31.5030405362487
Condition 3: 24 Hour
Replicate 10.84018782656131
Replicate 20.72640421719062
Replicate 30.32335954365533


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_212907.p1 GENE.S_Transcript_212907~~S_Transcript_212907.p1 ORF type:complete len:156 (+),score=41.24 S_Transcript_212907:589-1056(+)
ATGTCTGCTTATGGATTTGAGATTGTTGAGACATTGATTGTCGATATTGAGCCTGACCAACAAGTCAAGAAGGCTATGAACGAAATCAATTCTGCTGCACGACTAAGAGTGGCAGCAAATGAGAAAGCGGAAGCAGAGAAGATCATACAAATCAAAAGAGCAGAAGGAGAAGCAGAATCCAAGTACCTTGCTGGGATGGGTATTGCCAGGCAGAGACAGGCAATCGTCGAAGGTCTTAGAGACAGTGTACTCGGCTTCTCAGCCAATGTTCCTGGCGCTACTCCCAAGGATGTCATGGACATGGTCCTCATTACACAGTACTTCGACACCATGAAGGAGATTGGCGCAGCTTCTAAGTCATCAGCTGTGTTCATCCCACATGGACCTGGTGCTGTCCGTGACATTGCCACCCAAATCAGAGATGGGCTGCTACAAGCATCATCCACTAGTGATCATTCTCACCTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_212907.p1 GENE.S_Transcript_212907~~S_Transcript_212907.p1 ORF type:complete len:156 (+),score=41.24 S_Transcript_212907:589-1056(+)
MSAYGFEIVETLIVDIEPDQQVKKAMNEINSAARLRVAANEKAEAEKIIQIKRAEGEAESKYLAGMGIARQRQAIVEGLRDSVLGFSANVPGATPKDVMDMVLITQYFDTMKEIGAASKSSAVFIPHGPGAVRDIATQIRDGLLQASSTSDHSHL*

Click here to download the sequence:
Link to NCBI Protein BLAST