Transcript Information: S_Transcript_213409.p1


Annotated TAIR IDAT5G60860.1
Annotated Gene NameRAB GTPase Homolog A1F
Annotated Gene Symbol(s)AtRABA1f, RABA1f
Annotation TypeOrtholog
Chromosome Positionchr5:24484750-24485565 | Forward length=217
E-Value7E-147
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.4951124289427
Replicate 20.82632170627396
Replicate 32.2103653733154
Condition 2: 8 Hour
Replicate 11.8370186415508
Replicate 21.7595836008774
Replicate 31.1975195283697
Condition 3: 24 Hour
Replicate 10.32726417214373
Replicate 20.84883189424522
Replicate 30.85018127208256


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_213409.p1 GENE.S_Transcript_213409~~S_Transcript_213409.p1 ORF type:5prime_partial len:267 (+),score=57.24,Ras|PF00071.18|3.2e-61,Roc|PF08477.9|5.7e+03,Roc|PF08477.9|1.7e-34,Arf|PF00025.17|3.7e-12,MMR_HSR1|PF01926.19|1.4e+03,MMR_HSR1|PF01926.19|3.4e-06 S_Transcript_213409:1-801(+)
CCATTTTCTTTCTTTTCTCCCCAAAACAGCAACAAACATACATTCCCTCTTCCCGAACCTCGAGGAAGAGAGAGATTGAGAGTCAAAAACAAACAAACAAAAACAAAAACAAAAAACAAATACCAAAAAAAAAAAAAAACAATCTCAATGGCAGCATACAGAGCTGATGATGATTATGACTACTTGTTTAAGGTTGTTTTGATTGGTGATTCAGGTGTTGGAAAATCTAACCTTCTTTCTCGATTTACTCGTAATGAGTTTAGCCTTGAATCTAAATCCACCATTGGCGTTGAATTCGCCACTCGTAGCATTCGTGTTGATGATAAGATTGTTAAGGCTCAAATTTGGGATACTGCTGGCCAAGAAAGATACCGTGCAATCACCAGTGCATACTATCGAGGAGCTGTTGGTGCATTAGTCGTGTATGATGTTACTCGTCATGTCACCTTTGAGAATGTAGAGAGATGGCTTAAGGAGCTTCGTGATCATACAGATTCCAATATTGTGATAATGTTGGTTGGTAACAAGGCTGATCTACGTCACCTGCGTGCTGTTTCTGTTGAAGATGCAAAGGGTTTTGCTGAAAGGGAGAATACATTTTTCATGGAAACATCCGCCCTAGAGTCATTGAACGTCGAAAGTGCATTCACTGAAGTTCTATCCCAGATTTATCATGTTGTCAGCAAGAAGGCTCTCGACATAGGAGATGATCCAGCAGCCTTACCTAAGGGGCAGACAATTAACATTGGCTCCAAAGATGATGTATCAGCAGTTAAGAAAAGTGGATGTTGTTCCAATTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_213409.p1 GENE.S_Transcript_213409~~S_Transcript_213409.p1 ORF type:5prime_partial len:267 (+),score=57.24,Ras|PF00071.18|3.2e-61,Roc|PF08477.9|5.7e+03,Roc|PF08477.9|1.7e-34,Arf|PF00025.17|3.7e-12,MMR_HSR1|PF01926.19|1.4e+03,MMR_HSR1|PF01926.19|3.4e-06 S_Transcript_213409:1-801(+)
PFSFFSPQNSNKHTFPLPEPRGRERLRVKNKQTKTKTKNKYQKKKKTISMAAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDKIVKAQIWDTAGQERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKADLRHLRAVSVEDAKGFAERENTFFMETSALESLNVESAFTEVLSQIYHVVSKKALDIGDDPAALPKGQTINIGSKDDVSAVKKSGCCSN*

Click here to download the sequence:
Link to NCBI Protein BLAST