Transcript Information: S_Transcript_213422.p1


Annotated TAIR IDATMG00310.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)ORF154
Annotation TypeHomolog
Chromosome PositionchrM:90883-91347 | Reverse length=154
E-Value7E-28
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.4139735001614
Replicate 21.8420545361113
Replicate 31.1898539408775
Condition 2: 8 Hour
Replicate 11.6590910872912
Replicate 21.2735397707624
Replicate 31.3752159745149
Condition 3: 24 Hour
Replicate 11.8238612402014
Replicate 21.0751333764871
Replicate 31.2922110036777


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_213422.p1 GENE.S_Transcript_213422~~S_Transcript_213422.p1 ORF type:complete len:527 (+),score=60.56,RVT_1|PF00078.23|1.1e-40 S_Transcript_213422:1446-3026(+)
ATGAACTTGTTCGTGTCGTCGTCTAGCTCTCATGTGGAGGATGCTCTCAAGGGTCTTGACTGCCGTGTTACAGAGGCCATGAATAGTTCACTCACTCAGCCCTATTCGGTGGAAGAGGTCAAGCAGGCCTTGGGGCAAATGCACCCTATCAAAGCTCCCGGGCACGATGGTATGTGTCCTCTCTTTTTCCAAAAATATTGGCATATTGTGGGTAGTCATATTGCTTCTCTTGTTATTGCGTTTTTGGAGGGAGGGGAGATGGAGGAGGGTTTGAACCATACTTATATTGTGTTGATCCCAAAGAAGAAAAATCCTAAACGGATAATTGGATTTAGGCCCATTAGTTTGTGTAATGTGGTGTATAAGCTTATCTCCAAGGTTTTGGCAAATAGGCTTAAGCCTCTTCTCAATTCTATTGTGTCTTTAAATCAGAGTGCCTTTACTCCAGGCCGTTTAATTACTGATAACGTCCTGATGGCTTTCGAGACTTTTCATTTCATGAAGTCTAGTAAGTCTAAGGATGGGAATATAGCTCTTAAGCTTGATATGGCAAAGGCATATGATCGTGTTGAGTGGGATTTTCTTGAATTGGTTTTGACTAAGTTTGGTTTTAATTCTACTTGGATTGGACGAGTTATGGGCTGTGTTCGCAGTGTGTCTTTCTCCATACTAGTTAACGGGCAACCAACGGAGGTCTTTAGGCCAAGAAGGGGTCTTCGTCAAGGAGACCCAATCTCCCCGTACCTTTTTTTGCTTGTTACGGAAGTTTTATCTGGTTTAATTAGAAAAGCTAATGAGGATGCAGCTCTGTTTGGTGTTCACATTTGTCCTTCTGCCCCTACTGTTACTCACTTGTTTTTCGCAGATGATAGTTTATTATTTTTTAAAGCCACAGGAATCCATGCTCAAGCTTTGAAGAATATTCTTACGGTGTATGAAGAAGCATCTGGCCAGAAGATTAGTTATGAGAAGTCTTTATTATCATTTAGCCCCAATGTCCCTTTGAATTGTAAAGCTCCCTTATTGACCATGTTGGGGGTAGCTGAGGTAACGTCACATGATCGCTACCTTGGGTTACCAACTATGTTAGGTCATTCCAAGAAGCAGTTATTTGGCCCCCTCAAGGAAAGGCTTTGGAAGAAACTACAAGGATGGAAAAGATCTCTATTGTCGAAAGCGGGTAGAGAAATCATGATAAAGGCAGTAGCCCAGTCGATATCTACCTATGCGATGAGTGTGTTCAAATTTTCAACAAGCATTTGTAATGAGATAAGATCCATGGTTGCTAATTTTTTCTGGGGACAAAAAAAGAACGAGAGAAAAATCAATTGGGTCTCTTGGAATAGATTATGTACGTCCAAGCTTCATGGGGGCATGGGCTTTAGGGATCTCAAGGCTTTCAATTGGGCACTACTTGGGAAACAAGCATGGCGTCTTGCTCGGGGAGAAGGGGGCCTGCTTGAGCAGCTTCTTAAAGCTCGTTATTATCCTCATACGAGTTTTATGGAGGCTAGTTTAGGCTCAAATCCAAGCTACACATGGCGGGGTATTTGGGAAGCACGCTGGGTGGTACGTAAATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_213422.p1 GENE.S_Transcript_213422~~S_Transcript_213422.p1 ORF type:complete len:527 (+),score=60.56,RVT_1|PF00078.23|1.1e-40 S_Transcript_213422:1446-3026(+)
MNLFVSSSSSHVEDALKGLDCRVTEAMNSSLTQPYSVEEVKQALGQMHPIKAPGHDGMCPLFFQKYWHIVGSHIASLVIAFLEGGEMEEGLNHTYIVLIPKKKNPKRIIGFRPISLCNVVYKLISKVLANRLKPLLNSIVSLNQSAFTPGRLITDNVLMAFETFHFMKSSKSKDGNIALKLDMAKAYDRVEWDFLELVLTKFGFNSTWIGRVMGCVRSVSFSILVNGQPTEVFRPRRGLRQGDPISPYLFLLVTEVLSGLIRKANEDAALFGVHICPSAPTVTHLFFADDSLLFFKATGIHAQALKNILTVYEEASGQKISYEKSLLSFSPNVPLNCKAPLLTMLGVAEVTSHDRYLGLPTMLGHSKKQLFGPLKERLWKKLQGWKRSLLSKAGREIMIKAVAQSISTYAMSVFKFSTSICNEIRSMVANFFWGQKKNERKINWVSWNRLCTSKLHGGMGFRDLKAFNWALLGKQAWRLARGEGGLLEQLLKARYYPHTSFMEASLGSNPSYTWRGIWEARWVVRK*

Click here to download the sequence:
Link to NCBI Protein BLAST