Transcript Information: S_Transcript_213558.p1


Annotated TAIR IDAT3G26630.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:9791572-9792939 | Reverse length=455
E-Value4.4E-91
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.2826609453086
Replicate 23.3045587883502
Replicate 33.4123124031331
Condition 2: 8 Hour
Replicate 11.033388958099
Replicate 21.8725335865851
Replicate 31.3146337729944
Condition 3: 24 Hour
Replicate 15.1003472467026
Replicate 23.694101446365
Replicate 33.1110891777236


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_213558.p1 GENE.S_Transcript_213558~~S_Transcript_213558.p1 ORF type:5prime_partial len:227 (-),score=38.43,PPR_2|PF13041.2|1.9e-15,PPR_2|PF13041.2|0.0086,PPR_2|PF13041.2|1.1e-07,PPR_2|PF13041.2|4,PPR|PF01535.16|2e+03,PPR|PF01535.16|2e-09,PPR|PF01535.16|5.7e+02,PPR|PF01535.16|0.00038,PPR|PF01535.16|5.7e-08,PPR|PF01535.16|0.13,PPR_3|PF13812.2|1.6e+04,PPR_3|PF13812.2|3.5e-06,PPR_3|PF13812.2|40,PPR_3|PF13812.2|0.0058,PPR_3|PF13812.2|0.036,PPR_3|PF13812.2|4.2,PPR_1|PF12854.3|1.3e+03,PPR_1|PF12854.3|6.7e-06,PPR_1|PF12854.3|2.5e+02,PPR_1|PF12854.3|1.4,PPR_1|PF12854.3|0.074,PPR_1|PF12854.3|2e+02 S_Transcript_213558:182-862(-)
GCTAGGGTTGTTTTCGATCGAATGCCTGTGAGAAATGTGGTTTCTTGGACTGCTATGATTAATGGGTATGTCGCGAATGAGAGGCCTCAGGAAGCGTTCGAGTTGTTCTCTGAGATGCAGGTGGAAGGAGTGAGGCCTAATGAGTTCACCCTTGTTTCCTTGCTTAGAGCATGTACAGAGCTTGGGAGTGTAAAGTTAGGGTCCTGGGTACATGAGTATGCTTTGAAGAACGGGTTTGAATTGGGTGTGTATCTTGGGACGGCGCTTGTTGACATGTATAGCAAGTGTGGTAGTATAGAGAAGGCAGGGAAAGTTTTCGATATGATGGAAAAGAGGAGCTTAGCGACGTGGAATTCCATGATTACTAGCTTCGGTGTACATGGGTGTGGAGAAGAGGCATTGGCACTTTTTGAACAGATGATGGAGGAGGATATGATGCCTGATGCAATCACATTTGTTGGGGTATTGAGTGCTTGTATTCAAACAAATAATGTGGATAAAGGTTTGAAGTACTTTCAATACATGATAGAAGAATGTGGTATTCTGCCTATCTTGGAACATTACATTTATATGTTTGAGCTATGGGGTCGCTCAAAGATGATTGCGGAGACTAGACCGGTACTAGGACAAAGCATTGTACAGAAAACAGACACTGAGGCATTAAGGAAAACTCTTAGTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_213558.p1 GENE.S_Transcript_213558~~S_Transcript_213558.p1 ORF type:5prime_partial len:227 (-),score=38.43,PPR_2|PF13041.2|1.9e-15,PPR_2|PF13041.2|0.0086,PPR_2|PF13041.2|1.1e-07,PPR_2|PF13041.2|4,PPR|PF01535.16|2e+03,PPR|PF01535.16|2e-09,PPR|PF01535.16|5.7e+02,PPR|PF01535.16|0.00038,PPR|PF01535.16|5.7e-08,PPR|PF01535.16|0.13,PPR_3|PF13812.2|1.6e+04,PPR_3|PF13812.2|3.5e-06,PPR_3|PF13812.2|40,PPR_3|PF13812.2|0.0058,PPR_3|PF13812.2|0.036,PPR_3|PF13812.2|4.2,PPR_1|PF12854.3|1.3e+03,PPR_1|PF12854.3|6.7e-06,PPR_1|PF12854.3|2.5e+02,PPR_1|PF12854.3|1.4,PPR_1|PF12854.3|0.074,PPR_1|PF12854.3|2e+02 S_Transcript_213558:182-862(-)
ARVVFDRMPVRNVVSWTAMINGYVANERPQEAFELFSEMQVEGVRPNEFTLVSLLRACTELGSVKLGSWVHEYALKNGFELGVYLGTALVDMYSKCGSIEKAGKVFDMMEKRSLATWNSMITSFGVHGCGEEALALFEQMMEEDMMPDAITFVGVLSACIQTNNVDKGLKYFQYMIEECGILPILEHYIYMFELWGRSKMIAETRPVLGQSIVQKTDTEALRKTLS*

Click here to download the sequence:
Link to NCBI Protein BLAST