Transcript Information: S_Transcript_213654.p1


Annotated TAIR IDAT1G21410.1
Annotated Gene NameF-box/RNI-like superfamily protein
Annotated Gene Symbol(s)SKP2A
Annotation TypeOrtholog
Chromosome Positionchr1:7497479-7499386 | Forward length=360
E-Value1.8E-42
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 18.5051859617587
Replicate 26.1411888459062
Replicate 35.1335450954352
Condition 2: 8 Hour
Replicate 16.5954815413813
Replicate 27.8416789046464
Replicate 37.6912852182922
Condition 3: 24 Hour
Replicate 111.485454206395
Replicate 27.2430738027502
Replicate 33.6402950687796


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_213654.p1 GENE.S_Transcript_213654~~S_Transcript_213654.p1 ORF type:5prime_partial len:97 (-),score=11.05,LRR_4|PF12799.3|1.5,LRR_4|PF12799.3|1.6,LRR_4|PF12799.3|0.0023,LRR_6|PF13516.2|0.4,LRR_6|PF13516.2|3.5,LRR_6|PF13516.2|1.6 S_Transcript_213654:22-312(-)
GCTTTTAATGATGCCGGGCTTGCATATTTGACTAGCTCTTGCAAAAAGTTGAAGTCGTTGAATCTTTGTGGATGTGTGAGGGCTGCAACTGATAGGGCATTACAGGCCATTTCATATAACTGCAGTGAGCTGCAAAATCTCAATTTGGGGTGGTGTGAGAACGTTAGCGATTTGGGTGTGACAAGTCTGGCATATGGTTGCCCGAATCTCAGAGCCCTTGACTTGTGTGGATGTGTTCTTATAACTGGTATGTTATGTGGAAATTTGCCCTTGTTCTTATACTTTGGCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_213654.p1 GENE.S_Transcript_213654~~S_Transcript_213654.p1 ORF type:5prime_partial len:97 (-),score=11.05,LRR_4|PF12799.3|1.5,LRR_4|PF12799.3|1.6,LRR_4|PF12799.3|0.0023,LRR_6|PF13516.2|0.4,LRR_6|PF13516.2|3.5,LRR_6|PF13516.2|1.6 S_Transcript_213654:22-312(-)
AFNDAGLAYLTSSCKKLKSLNLCGCVRAATDRALQAISYNCSELQNLNLGWCENVSDLGVTSLAYGCPNLRALDLCGCVLITGMLCGNLPLFLYFG*

Click here to download the sequence:
Link to NCBI Protein BLAST