Transcript Information: S_Transcript_213657.p1


Annotated TAIR IDAT1G56710.1
Annotated Gene NamePectin lyase-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:21258206-21259922 | Reverse length=434
E-Value7.1E-184
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.75728052295229
Replicate 20.5829598866823
Replicate 30.89964566261466
Condition 2: 8 Hour
Replicate 10.99691865303671
Replicate 20.72753979316184
Replicate 31.1264472311575
Condition 3: 24 Hour
Replicate 10.39960152726697
Replicate 20.23032328837751
Replicate 30.66643613265551


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_213657.p1 GENE.S_Transcript_213657~~S_Transcript_213657.p1 ORF type:complete len:492 (+),score=65.29,Glyco_hydro_28|PF00295.13|7.3e-88,Pectate_lyase_3|PF12708.3|1.3e-08,Pectate_lyase_3|PF12708.3|5.4e+02,Beta_helix|PF13229.2|2.3e-08 S_Transcript_213657:3179-4654(+)
ATGGATCATACATCTGTTTTTTTCACCATCTTTTTCTCCTTGTGCTTTCTTATTAGCTCGGTTCAAGGGAGTAGGTTCATAACAACAATGTTTATGCATGGCATCCATGCAAATTTAAAGATCTCTGTGCCACCTTCTCCTGCCCCTATTGCTAATAATGGTCCTAGATATGATCATGATCATAATGTTGAATATTATTCTCCTCCTCCTAGCAATAATGATAGCTCTAATGTTGGACAAATGAACAATGTTTTTGATGTTCGATCCTATGGGGCCGTTGGGGATGGCTTAATAGATGATACAGCTGCATTCAAATCAGCTTGGGATGCTGCTTGTCAAGTAGATAGTGCAAAGGTTGTTGCACCTCAAGGATATTCCTTCTTGCTTCAATCTTCAATTTTCACTGGCCCTTGCAAGAGTGGAGTGGTGTTTCAGATTGAAGGAACAGTTGTACCACCAGATGGACCAGATTCATGGCCTAAGAGTAGCAGCAAAAGGCAATGGTTAATCTTTTATAGAACTCATGGCTTGACTTTCCAAGGTGGTGGCCTTATTGATGGCAGAGGAGAAAAGTGGTGGAATCTTACTTGTAAACCTCATAAAGGCATCAATGGTACCACATTGCCTGGTCCTTGTGACAGCCCAGTTGCTATAAGATTTTTCGGGTGTACAAACTTGACAATTCGAGGGCTAAATCTCATCAACAGCCCTCAGTTTCATATTCGGATTGATGCTTGTCAAAATGTGAATGTGGATTCTCTCTCCATTAAGTCTCCAGCTAATAGTCCCAATACTGATGGCATTCACGTTGAGAACACAAGTGATGTCACAATATACAACTCTCTCATCTCCAATGGTGATGATTGTATATCAATTGGAGCTGGTAGTCATAATTTGGACATAAGGAATGTTACCTGTGGTCCTAGTCATGGAATAAGCATTGGGAGCCTAGGAGTTCACAACAGCCGGGCCTGTGTATCAAACATAACAGTAACCGACTGCCTGATCAAGCACTCAGACAATGGGGTCCGGATCAAGACATGGCAAGGCGGGTCTGGATCTGTATCCGGTGTAACCTTTGACGGGATCCGGATGGATACTGTCCGAAACCCGATTATCGTAGACCAATACTATTGCCTATATAGCAACTGCTCCAATCAGACATCAGCTGTCTCCATTTCCACAATATCCTACTCCAATATCAAGGGGACATTTGATCCTAGGGCCCCACCTGTCCACCTGGCATGCAGCGATTCGGTCCCATGTACCAACATTACACTGTCGGGTCTGGAGCTCCTGCCCGCTGTGACAACTTATTCGGGTTTGGGTCGCAAGTATAGGGCCTTAACAGAGCCCTTTTGTTGGAATGCTTATGGGAGTACTTTGGATCAGGGGTTTTCAACCCCTCCTGTCTATTGTTTGTTGAAGGGCTTGCCATACTTGGATTTACCAGGAACTGATTTTGGACAGTGCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_213657.p1 GENE.S_Transcript_213657~~S_Transcript_213657.p1 ORF type:complete len:492 (+),score=65.29,Glyco_hydro_28|PF00295.13|7.3e-88,Pectate_lyase_3|PF12708.3|1.3e-08,Pectate_lyase_3|PF12708.3|5.4e+02,Beta_helix|PF13229.2|2.3e-08 S_Transcript_213657:3179-4654(+)
MDHTSVFFTIFFSLCFLISSVQGSRFITTMFMHGIHANLKISVPPSPAPIANNGPRYDHDHNVEYYSPPPSNNDSSNVGQMNNVFDVRSYGAVGDGLIDDTAAFKSAWDAACQVDSAKVVAPQGYSFLLQSSIFTGPCKSGVVFQIEGTVVPPDGPDSWPKSSSKRQWLIFYRTHGLTFQGGGLIDGRGEKWWNLTCKPHKGINGTTLPGPCDSPVAIRFFGCTNLTIRGLNLINSPQFHIRIDACQNVNVDSLSIKSPANSPNTDGIHVENTSDVTIYNSLISNGDDCISIGAGSHNLDIRNVTCGPSHGISIGSLGVHNSRACVSNITVTDCLIKHSDNGVRIKTWQGGSGSVSGVTFDGIRMDTVRNPIIVDQYYCLYSNCSNQTSAVSISTISYSNIKGTFDPRAPPVHLACSDSVPCTNITLSGLELLPAVTTYSGLGRKYRALTEPFCWNAYGSTLDQGFSTPPVYCLLKGLPYLDLPGTDFGQC*

Click here to download the sequence:
Link to NCBI Protein BLAST