Transcript Information: S_Transcript_213657.p2


Annotated TAIR IDAT5G26749.2
Annotated Gene NameC2H2 and C2HC zinc fingers superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:9398285-9399239 | Reverse length=166
E-Value1.7E-36
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.9779933350472
Replicate 22.6833122434815
Replicate 33.6137793677325
Condition 2: 8 Hour
Replicate 13.3140809276626
Replicate 23.0232227891522
Replicate 31.8723379653024
Condition 3: 24 Hour
Replicate 12.9520112825127
Replicate 23.3689449640516
Replicate 34.0900612548837


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_213657.p2 GENE.S_Transcript_213657~~S_Transcript_213657.p2 ORF type:complete len:148 (+),score=15.98,zf-U1|PF06220.8|3.5e-11,zf-CCCH|PF00642.20|1.1e-07 S_Transcript_213657:147-590(+)
ATGCCGATAGGGAAGTACTACTGCGATTACTGCGACAAAGAATTCCAAGATACTCCAGCAGCAAGAAAGCGTCATCTACAAGGTATTCAACATCAGCGTAATCGAGCTCTTTGGTACGATTCTCTCCATCTTCAAGAACAATATCAAATCCCTGTACCGGCACAGACCTTTGGGAAAGGAGTTTGCCATCGCTTCATCAAAACGGGTTTTTGTCCCTATGGGGATTCTTGCAAATATCATCATCCTAAGCATAGCTTGCAAGGCGGGATTGCTCAAGGATCCTCTAGTGTTGCTGACAATTTGCAACAACAAGTCGGCGGAGGATCTTTCCAAGGTCATGTAGCTAAACAAAGCTTTGGGATATCATTAGGGAATCTACCTCCATCTCTATGGCCTCCTCCTGAAGGTGGATTTCCAACACTTCCATTTGTTGACTGGGGATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_213657.p2 GENE.S_Transcript_213657~~S_Transcript_213657.p2 ORF type:complete len:148 (+),score=15.98,zf-U1|PF06220.8|3.5e-11,zf-CCCH|PF00642.20|1.1e-07 S_Transcript_213657:147-590(+)
MPIGKYYCDYCDKEFQDTPAARKRHLQGIQHQRNRALWYDSLHLQEQYQIPVPAQTFGKGVCHRFIKTGFCPYGDSCKYHHPKHSLQGGIAQGSSSVADNLQQQVGGGSFQGHVAKQSFGISLGNLPPSLWPPPEGGFPTLPFVDWG*

Click here to download the sequence:
Link to NCBI Protein BLAST