Transcript Information: S_Transcript_213670.p1


Annotated TAIR IDATMG01250.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)
Annotated Gene Symbol(s)ORF102
Annotation TypeHomolog
Chromosome PositionchrM:310514-310882 | Forward length=122
E-Value3E-14
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.092406254288821
Replicate 20.30642763274326
Replicate 30.19211183420417
Condition 2: 8 Hour
Replicate 10.44427896494027
Replicate 20.4660801799943
Replicate 30.14802671947904
Condition 3: 24 Hour
Replicate 10.30340115959159
Replicate 20.23608137058695
Replicate 30.35030617229328


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_213670.p1 GENE.S_Transcript_213670~~S_Transcript_213670.p1 ORF type:complete len:288 (+),score=27.98,RVT_1|PF00078.23|1.1e-45 S_Transcript_213670:2637-3500(+)
ATGGTTCAAGCCTTTTTCCATAGTGGCCATATGCTTAGAGAATTAAATCATACCTTTATTACTCTTGTCCCTAAACATGAGAAAGCCTCTAAAGTGTCGGACTATAGGCCTATATCTCTTTGCAATGTGTCTTATAAGGTTGTTTCCAAGATTATTGCTAATAGACTCAAATCTTTCCTTGACTACTTTGTGAGTCCCTATCAAGCCTCCTTTGTGCCGGGGAGATTTATTTCCGATAACACAGTCCTTATTAATGAAATTATGCATGTTATGTCCAAGAGCTGTTCCAAAGAAGGTTTGATGGCTATTAAAATTGACATGGCTAAGGCGTATGATAAATTGGAATGGCCTTTCTTGACTAGAGTCCTGAAGGAGGTGGGTTTCTCTAATAAGGTGGTACAGCTTATCCACCAGTGTATTAGTACTACCTCTTATTCGGTGTTGATCAATGGGAGACCTAGTGAACTTCTACGCCCTCAAAGGGGCCTGAGACAAGGGGATCCTTTGTCCCCTTTTTTATTTGTGATTGCTATGGAGGTTGTGTCTAGGCTGGCTCTGAGTAAGCAGGAGTCAGGTGATCTGGTTGGTATTTCTATTGACAAAAAATGTCAGCCTATAACCCATCTTATGTATGCTGATGACCTAGTCATGTTTGCTAGGGCTAATGAAACAAATGCAATTGCTATTAATGATATTTTGCAGACCATGGCACAATGGAGTGGGTTGGCGGCCAATGAGTCCAAGTCTGGAATTTACTTTAGTAAGAAGACAAAGCCGGCAAAAATTCTGTCTACTTGGGTTTGCCTATGTTCAGATCCAGGGGGAGGTATAAGAGGTTTGAGTATATCAAAGACAGGGTGTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_213670.p1 GENE.S_Transcript_213670~~S_Transcript_213670.p1 ORF type:complete len:288 (+),score=27.98,RVT_1|PF00078.23|1.1e-45 S_Transcript_213670:2637-3500(+)
MVQAFFHSGHMLRELNHTFITLVPKHEKASKVSDYRPISLCNVSYKVVSKIIANRLKSFLDYFVSPYQASFVPGRFISDNTVLINEIMHVMSKSCSKEGLMAIKIDMAKAYDKLEWPFLTRVLKEVGFSNKVVQLIHQCISTTSYSVLINGRPSELLRPQRGLRQGDPLSPFLFVIAMEVVSRLALSKQESGDLVGISIDKKCQPITHLMYADDLVMFARANETNAIAINDILQTMAQWSGLAANESKSGIYFSKKTKPAKILSTWVCLCSDPGGGIRGLSISKTGC*

Click here to download the sequence:
Link to NCBI Protein BLAST