Transcript Information: S_Transcript_21392.p1


Annotated TAIR IDAT2G44200.1
Annotated Gene NameCBF1-interacting co-repressor CIR, N-terminal;Pre-mRNA splicing factor
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:18276302-18278240 | Forward length=493
E-Value1.6E-133
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 124.502719198911
Replicate 222.645946990753
Replicate 320.148892285167
Condition 2: 8 Hour
Replicate 127.056001812045
Replicate 223.308115433019
Replicate 324.179871181862
Condition 3: 24 Hour
Replicate 123.144028544
Replicate 222.314369547637
Replicate 322.110955227392


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_21392.p1 GENE.S_Transcript_21392~~S_Transcript_21392.p1 ORF type:complete len:454 (+),score=121.69,Cir_N|PF10197.5|2.2e-15,Cir_N|PF10197.5|9.9e+02,Cir_N|PF10197.5|1.6e+04,Cir_N|PF10197.5|4.3e+03,Cir_N|PF10197.5|1.2e+04,Cir_N|PF10197.5|5.1e+03,CWC25|PF12542.4|8.8e+03,CWC25|PF12542.4|7.1e-13,CWC25|PF12542.4|1.6e+04 S_Transcript_21392:127-1488(+)
ATGGCGTTGAAGTTCCTAAACAAGAAAGGATGGCATACAGGAAGTCTTCGAAACATAGAAAACGTATGGAAAGCAGAGCAAAAGCACGACGCAGAGCAACGCAAATTAGAGGAGCTTCGTAAGCAGATTCAAGAGGAGAGAGAACGCGACGAGTTTCGTGAACTCCAACAGAAAGCCGGCCTTACTCCGAGGCAGGAAAGATTGGAATTTCTTTATGATTCTGGGCTGGCTGTTGGGAAATCAAGTTCTGATGGATTTAAGGCGCTTGAAGCTTATCCTCGTCCCGATAACTCGGCACCGGCTTCCGGTTCAGGTTCGGCACCGGCACCGGATTCTTCGAAGTCTGCTGTCCCTGGAGCCTTATTTGAAGATAAACCGCAATCAGCCAATGATGCATGGAGGAAGCTCCATTCAGATCCACTGCTGATGATTCGACAAAGGGAGCAAGAGGCTTTGGCAAGAATAAAGAACAACCCAGTGAAGATGGCCATGATTCGTAAATCTTTGGAAGCAAAGAAAGATGATGGAGCTGTTGATGGGGAACACCAGAAGGTCAAGTCAAAACACAAAAAGCACTCGTCATCTAAGTATCATTCAGACTCGGAAAGTGATAGCCATGAAGAAAAAGAAAAGAGGAAAAAGGCAAAGCATAAGAAGAAAGAACATCTAGAATCAGATGAGGACTCAAGGGAGAGAATAAGACATCATAGGCATTCCCGCAGGGACAACGGACGTGAAAGGCAGAGGCATAGAAGTCCATTGAAACAAAAGGCAGACCAAAATGAAGAAGATTCAAAAGATAGAACAAGGCATCATAGACATTCCCTGAAGGACTATGAAAGTGAAAAGCAACGACATAGCAGTCCATCAAAACGAAGAGAGAGAGGTGAAGATCATGAACGAAGCAAAAGAAGCTACAAGAAGTCCAAGAATGAGGACTACCGTCTGGACAGTCAGACAGATAAATCTGTCCACAAGCCAAAGGATAATGGTAGCTCATGTCAAGCAAGTGATTCCAATTATTCTGCTGTGCCACCTAGACCTGATTCACATAAACGTCGGGGTAGAGCTCCTCAGCTTTCTGAGGAAGAGAGAGCCGCTCGGTTGAGGGAGATGCAAATGGATGCTGAATTACATGAAGAACAAAGATGGAAAAGATTGAAGAAGGCTGATGAGGATGATGCACGTGAAGCAAGCCAGGCCGGTGCTTCTAGGGGAAGGTCATTTTTGGATGCTGTCCAAAAGAGTGTGTATGGCGCTGAAAAGGGTGGAAGCTCAACTATTGAGGAGAGTGTTCGTCGCCGTACCCATTTTCTCCAGGGTGGGAGAGAAGCCGATGAGCGCAATGCTTTCAGGAGGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_21392.p1 GENE.S_Transcript_21392~~S_Transcript_21392.p1 ORF type:complete len:454 (+),score=121.69,Cir_N|PF10197.5|2.2e-15,Cir_N|PF10197.5|9.9e+02,Cir_N|PF10197.5|1.6e+04,Cir_N|PF10197.5|4.3e+03,Cir_N|PF10197.5|1.2e+04,Cir_N|PF10197.5|5.1e+03,CWC25|PF12542.4|8.8e+03,CWC25|PF12542.4|7.1e-13,CWC25|PF12542.4|1.6e+04 S_Transcript_21392:127-1488(+)
MALKFLNKKGWHTGSLRNIENVWKAEQKHDAEQRKLEELRKQIQEERERDEFRELQQKAGLTPRQERLEFLYDSGLAVGKSSSDGFKALEAYPRPDNSAPASGSGSAPAPDSSKSAVPGALFEDKPQSANDAWRKLHSDPLLMIRQREQEALARIKNNPVKMAMIRKSLEAKKDDGAVDGEHQKVKSKHKKHSSSKYHSDSESDSHEEKEKRKKAKHKKKEHLESDEDSRERIRHHRHSRRDNGRERQRHRSPLKQKADQNEEDSKDRTRHHRHSLKDYESEKQRHSSPSKRRERGEDHERSKRSYKKSKNEDYRLDSQTDKSVHKPKDNGSSCQASDSNYSAVPPRPDSHKRRGRAPQLSEEERAARLREMQMDAELHEEQRWKRLKKADEDDAREASQAGASRGRSFLDAVQKSVYGAEKGGSSTIEESVRRRTHFLQGGREADERNAFRR*

Click here to download the sequence:
Link to NCBI Protein BLAST