Transcript Information: S_Transcript_21393.p1


Annotated TAIR IDAT2G44200.1
Annotated Gene NameCBF1-interacting co-repressor CIR, N-terminal;Pre-mRNA splicing factor
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr2:18276302-18278240 | Forward length=493
E-Value4E-31
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 119.570563582417
Replicate 216.777553061843
Replicate 313.819208931723
Condition 2: 8 Hour
Replicate 121.978814532978
Replicate 223.68050830946
Replicate 317.872061640945
Condition 3: 24 Hour
Replicate 116.550998076439
Replicate 213.257382816248
Replicate 318.898969206062


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_21393.p1 GENE.S_Transcript_21393~~S_Transcript_21393.p1 ORF type:5prime_partial len:359 (+),score=104.97,CWC25|PF12542.4|2.7e-10,CWC25|PF12542.4|1.6e+04 S_Transcript_21393:2-1078(+)
TTGTGCAGTTTTAGAGTTGCCTTCAGAACTTTCCCTCTTCCTTTCTTCTTGTTGCAGTCTGCTGTCCCTGGAGCCTTATTTGAAGATAAACCGCAATCAGCCAATGATGCATGGAGGAAGCTCCATTCAGATCCACTGCTGATGATTCGACAAAGGGAGCAAGAGGCTTTGGCAAGAATAAAGAACAACCCAGTGAAGATGGCCATGATTCGTAAATCTTTGGAAGCAAAGAAAGATGATGGAGCTGTTGATGGGGAACACCAGAAGGTCAAGTCAAAACACAAAAAGCACTCGTCATCTAAGTATCATTCAGACTCGGAAAGTGATAGCCATGAAGAAAAAGAAAAGAGGAAAAAGGCAAAGCATAAGAAGAAAGAACATCTAGAATCAGATGAGGACTCAAGGGAGAGAATAAGACATCATAGGCATTCCCGCAGGGACAACGGACGTGAAAGGCAGAGGCATAGAAGTCCATTGAAACAAAAGGCAGACCAAAATGAAGAAGATTCAAAAGATAGAACAAGGCATCATAGACATTCCCTGAAGGACTATGAAAGTGAAAAGCAACGACATAGCAGTCCATCAAAACGAAGAGAGAGAGGTGAAGATCATGAACAAAGCAAAAGAAGCTACGAGAAGTCCAAGAATGAGTACTACCGTGTGGACAGTCAGATAGATAAATCTGTCCACAAGCCAAAGGATAATGGTAGCTCATGTCAAGCAAGTGATTCCAATTATTCTGCTGTGCCACCTAGACCTGATTCACATAAACGTCGGGGTAGAGCTCCTCAGCTTTCTGAGGAAGAGAGAGCCGCTCGGTTGAGGGAGATGCAAATGGATGCTGAATTACATGAAGAACAAAGATGGAAAAGATTGAAGAAGGCTGATGAGGATGATGCACGTGAAGCAAGCCAGGCCGGTGCTTCTAGGGGAAGGTCATTTTTGGATGCTGTCCAAAAGAGTGTGTATGGCGCTGAAAAGGGTGGAAGCTCAACTATTGAGGAGAGTGTTCGTCGCCGTACCCATTTTCTCCAGGGTGGGAGAGAAGCCGATGAGCGCAATGCTTTCAGGAGGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_21393.p1 GENE.S_Transcript_21393~~S_Transcript_21393.p1 ORF type:5prime_partial len:359 (+),score=104.97,CWC25|PF12542.4|2.7e-10,CWC25|PF12542.4|1.6e+04 S_Transcript_21393:2-1078(+)
LCSFRVAFRTFPLPFFLLQSAVPGALFEDKPQSANDAWRKLHSDPLLMIRQREQEALARIKNNPVKMAMIRKSLEAKKDDGAVDGEHQKVKSKHKKHSSSKYHSDSESDSHEEKEKRKKAKHKKKEHLESDEDSRERIRHHRHSRRDNGRERQRHRSPLKQKADQNEEDSKDRTRHHRHSLKDYESEKQRHSSPSKRRERGEDHEQSKRSYEKSKNEYYRVDSQIDKSVHKPKDNGSSCQASDSNYSAVPPRPDSHKRRGRAPQLSEEERAARLREMQMDAELHEEQRWKRLKKADEDDAREASQAGASRGRSFLDAVQKSVYGAEKGGSSTIEESVRRRTHFLQGGREADERNAFRR*

Click here to download the sequence:
Link to NCBI Protein BLAST