Transcript Information: S_Transcript_214127.p1


Annotated TAIR IDAT3G24255.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:8789471-8793208 | Forward length=746
E-Value8E-24
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.0196552197387
Replicate 20.71851996643247
Replicate 30.63595641667588
Condition 2: 8 Hour
Replicate 11.1030374301965
Replicate 20.90001689929935
Replicate 30.89836905614864
Condition 3: 24 Hour
Replicate 11.0880593309491
Replicate 20.60784168978709
Replicate 30.6281352054914


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_214127.p1 GENE.S_Transcript_214127~~S_Transcript_214127.p1 ORF type:complete len:522 (+),score=63.47,RVT_1|PF00078.23|1.5e-26,zf-RVT|PF13966.2|1.6e+04,zf-RVT|PF13966.2|1.4e-17,zf-RVT|PF13966.2|9.4e+03 S_Transcript_214127:3056-4621(+)
ATGAAAATTGACCTCAAAAAAGCCTATGATTCAGTTGACTGGGAATTTCTCCATGAGATGCTAGTAGCTTTAAATTTCCCTGCTGGTTTTGTTACTTGGCTGATGGCATGCACTAGTAGCTCTGCTTACACTATTGCTTTAAATGGGTGGTATCAAGGGTTCTTTAAAGGGGCTAAAGGTTTAAGGCAAGGTGATCCTCTTTCTCCAATCTTATTTGTGATATGCATGGAGTACCTAACTAGAATCCTTCAAGTGGTGGGAGAAATGCAGAATTTTTCCTTTCACCCTTTGTGTAAGAGTATGGCTCTAAACCACATCTGTTTTACGGATGACCTAATTTTGTTTTGTTCTGGAGATTATAAGTCTGTGAATCTTATATTGAGTGGATTTAAATGTTTTTATGAAACTTTTGGGTTAGAAATGAATAAGCAGAAATCAGCCATGTATTTAGGAGTGGTGGATCAGTGTAGGGAGGTTCTTTCACAGATTACAGGTCTTTCCATATCTGCCTTGCCTTTTTCGTATCTGAGGGTTCCTATTACCTCTAACAGGCTGTCTATTGTTGATTGTGACTGTTTAGTGGAGAAATTGACCTCCAGAATCAGACAAAGGAGATATCGACACCTTTCTTATGCTGGTAGACTGGTATTAATCAATGCTGTTTTGATGAGCTTGTATACTTACTGGGCTGCTATGTTCTTGATTCCCAAAACTGTGCTTCAGAAGATCATGACTGTGTGTAGGAATTTCTTATGGGGAGGCTCAGATTCTTATAAGAGTCCTCCTCCTATGGCTTGGGAATATATATGCCAAAAGAAAAAGCATGGAGGATTGGGGGTTAGAGATTGTATAGCAAGTAATCTGGTTGTGCTTGGTTGCTATGTCTCGGCAATTGCTTTAAAGGAAGACTCGTTATGGGTTAAATGGGTGCATAATGTATATATAACTCAAGATGATTGGTGGAATCACTCACCTCCTGTTGATGCTAGCTGGTCTTGGAAAAATATATGCAGGGTGAGGGATATCTTTAAGGATGGATTTAATGGCAGTTGCTGGCTTACCTCCCCCCATGGTAAATACAATTCAGCAAGTGGGTATGATTGGCTCAAACAGGAAGGAAGTAGAGTTATATGGGATAAGGTGGTTTGGAATAAATATAATATCCCTAAACACTCTTTTATTGCTTGGTTGTTTATGTTAGGAAAGGCTAAAACTAGAGATAATTTGCAGAAGATTGGAATATGTCTTGATACTACCTGCCCAATCTGTGATGGAGATAGAGAGACTATTGCTCATCTATTTTTTACATGCCCCTTCAATGCTATTTTGATCAAGCTTTTTTGTGAGTGGTTTGGAGTGTTGAAGAGTTCTTGGACTTCATCATCTTTCCCAAGATGGATGCTCAAGTACTCAGGCTTATCTAAAAGTAGGTCTGAAAGTGATGAATGCTGGATTTGTTGGTCTAATCTGCACAATCTGGAAAGCACGCAATGCTGCCATTTGGGAGAGAAATGTTCCAGTGCCGGAACAGATATTCAGCAATTTGCAAAAGAAGCTGCATGGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_214127.p1 GENE.S_Transcript_214127~~S_Transcript_214127.p1 ORF type:complete len:522 (+),score=63.47,RVT_1|PF00078.23|1.5e-26,zf-RVT|PF13966.2|1.6e+04,zf-RVT|PF13966.2|1.4e-17,zf-RVT|PF13966.2|9.4e+03 S_Transcript_214127:3056-4621(+)
MKIDLKKAYDSVDWEFLHEMLVALNFPAGFVTWLMACTSSSAYTIALNGWYQGFFKGAKGLRQGDPLSPILFVICMEYLTRILQVVGEMQNFSFHPLCKSMALNHICFTDDLILFCSGDYKSVNLILSGFKCFYETFGLEMNKQKSAMYLGVVDQCREVLSQITGLSISALPFSYLRVPITSNRLSIVDCDCLVEKLTSRIRQRRYRHLSYAGRLVLINAVLMSLYTYWAAMFLIPKTVLQKIMTVCRNFLWGGSDSYKSPPPMAWEYICQKKKHGGLGVRDCIASNLVVLGCYVSAIALKEDSLWVKWVHNVYITQDDWWNHSPPVDASWSWKNICRVRDIFKDGFNGSCWLTSPHGKYNSASGYDWLKQEGSRVIWDKVVWNKYNIPKHSFIAWLFMLGKAKTRDNLQKIGICLDTTCPICDGDRETIAHLFFTCPFNAILIKLFCEWFGVLKSSWTSSSFPRWMLKYSGLSKSRSESDECWICWSNLHNLESTQCCHLGEKCSSAGTDIQQFAKEAAW*

Click here to download the sequence:
Link to NCBI Protein BLAST