Transcript Information: S_Transcript_214133.p2


Annotated TAIR IDAT1G43730.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:16508723-16509784 | Reverse length=320
E-Value5E-17
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.78273533044649
Replicate 20.50470433628302
Replicate 30.48216303486537
Condition 2: 8 Hour
Replicate 10.76659899832831
Replicate 21.6084335623333
Replicate 30.83591559235221
Condition 3: 24 Hour
Replicate 10.42833104883518
Replicate 21.4072301305575
Replicate 30.32969992686426


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_214133.p2 GENE.S_Transcript_214133~~S_Transcript_214133.p2 ORF type:complete len:306 (+),score=34.52,zf-RVT|PF13966.2|1.6e+04,zf-RVT|PF13966.2|6.5e-19 S_Transcript_214133:2533-3450(+)
ATGAAGATTATGGCTATATGTAGGAACTTCCTATGGGGTGGTTCAGACACATATAAAAGTCCTCCTCCAGTGGCTTGGGAATTCATCTGTCAAAAGAAAAAGTATGGAGGGTTGGGGATCAGAGACTGCATAGCGAGTAATATGGCTGCACTAGGGAATTATATATGGGCTATTTCTCAAAAAGAAGACTCACTGTGGGTGAAGTGGGTGCATAATGTATATATTATCCAAGGAGACTGGTGGGACCACACACCACCAATTGATTCAAGTTGGTCATGGAAGGTGCTTTGTCGTATGAGGGATAAATTCAAGGATGGTTTCAGGGGCAAATCTTGGACAGCATCTCCTCATGGAAAATACTCCTCCTCTAGTGGATATGAATGGCTAAGACAGGAAGGCACTAGAGTCCCATGGGATAAAATGGTTTGGAATCGGTTTAATATTCCTAAACACTCCTTTTTGGCCTGGATTATAATGCTGGGGAAAGTTAAAACAAGGGATCATCTTCATAAGATTGGGATTTGTCAAGATGTATCCTGCCCTCTATGTGATAAAGAACCAGAGACTATGGCCCATCTATTTTTTGTCTGTCCATTCAGTAATATAATGATCAACCTATTTTGTGATTGGATTGGGGTAATAAAGAAGGATTGGAGCCTGTTATCTCTTTCAAGATGGTTGCTCAGGAATTCTGGCCACTCTAGAACTGGAAGGAAGGTACTATATGCAGGGTATGTTGGATTGATATACTCAGTGTGGAAAGCTCGGAATCTTGCTGTTTGGGAAAGACTGATTCCTATCCCAGAACTGATGTTCAGGAAGCTACAGAAGCAGTTGCGCTATAGAATTGTTTCTTGCATGTCTGTAAAAACCCCTCGACAGGAGAGAGAATGGATAGCTAGTATGTTTAGCATTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_214133.p2 GENE.S_Transcript_214133~~S_Transcript_214133.p2 ORF type:complete len:306 (+),score=34.52,zf-RVT|PF13966.2|1.6e+04,zf-RVT|PF13966.2|6.5e-19 S_Transcript_214133:2533-3450(+)
MKIMAICRNFLWGGSDTYKSPPPVAWEFICQKKKYGGLGIRDCIASNMAALGNYIWAISQKEDSLWVKWVHNVYIIQGDWWDHTPPIDSSWSWKVLCRMRDKFKDGFRGKSWTASPHGKYSSSSGYEWLRQEGTRVPWDKMVWNRFNIPKHSFLAWIIMLGKVKTRDHLHKIGICQDVSCPLCDKEPETMAHLFFVCPFSNIMINLFCDWIGVIKKDWSLLSLSRWLLRNSGHSRTGRKVLYAGYVGLIYSVWKARNLAVWERLIPIPELMFRKLQKQLRYRIVSCMSVKTPRQEREWIASMFSI*

Click here to download the sequence:
Link to NCBI Protein BLAST