Transcript Information: S_Transcript_214221.p2


Annotated TAIR IDAT5G53110.1
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:21529022-21533008 | Forward length=382
E-Value2.8E-40
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.7701751749839
Replicate 21.6547092168136
Replicate 31.6905841409967
Condition 2: 8 Hour
Replicate 12.6656737896416
Replicate 22.4236169359704
Replicate 31.9539526971233
Condition 3: 24 Hour
Replicate 12.7306104363243
Replicate 21.6997858682261
Replicate 32.5222044405116


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_214221.p2 GENE.S_Transcript_214221~~S_Transcript_214221.p2 ORF type:complete len:120 (+),score=20.64,zf-RING_2|PF13639.2|3.8e-14,zf-rbx1|PF12678.3|3e-09,zf-C3HC4_2|PF13923.2|1.5e-07,zf-RING_11|PF17123.1|2.3e-07,zf-RING_11|PF17123.1|5.8e+03,zf-ANAPC11|PF12861.3|2.2e-06,zf-C3HC4|PF00097.21|2.9e-06 S_Transcript_214221:1011-1370(+)
ATGGCTGTAGGAATTTTCTTATGCATAATGGATAAAAGAGATGCTATTGGAGCAAACCGACGGCCATTACATCCTGCAGTGACACCCCAGCCATCAGAAGCATCAATGGGGCTTGATCAAGCCACCATTGACTCCTACACAAAGGTGGTGCTCGGAGAAAGCCGCCGGATTCCAGGTCTCAATGATGGATCATGCCCTATATGCTTATCAGATTTCAGTGCCAAAGAGACTTTGAGATGCATACCCGATTGCCAGCACTGCTTCCACGCTGACTGCATTGATGAGTGGTTGAAGATGAATGGCACTTGCCCTGTCTGCCGGAAGTCACCAGCTCATCATCTCCAAATCCAATCGGAGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_214221.p2 GENE.S_Transcript_214221~~S_Transcript_214221.p2 ORF type:complete len:120 (+),score=20.64,zf-RING_2|PF13639.2|3.8e-14,zf-rbx1|PF12678.3|3e-09,zf-C3HC4_2|PF13923.2|1.5e-07,zf-RING_11|PF17123.1|2.3e-07,zf-RING_11|PF17123.1|5.8e+03,zf-ANAPC11|PF12861.3|2.2e-06,zf-C3HC4|PF00097.21|2.9e-06 S_Transcript_214221:1011-1370(+)
MAVGIFLCIMDKRDAIGANRRPLHPAVTPQPSEASMGLDQATIDSYTKVVLGESRRIPGLNDGSCPICLSDFSAKETLRCIPDCQHCFHADCIDEWLKMNGTCPVCRKSPAHHLQIQSE*

Click here to download the sequence:
Link to NCBI Protein BLAST