Transcript Information: S_Transcript_214616.p1


Annotated TAIR IDAT5G16486.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:5383597-5384226 | Reverse length=209
E-Value1E-06
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.4649358478081
Replicate 20.2024109133717
Replicate 30
Condition 2: 8 Hour
Replicate 12.3477493927119
Replicate 23.0786947669348
Replicate 30.78223293963234
Condition 3: 24 Hour
Replicate 12.2045295265737
Replicate 20.41584975369445
Replicate 31.6197643195946


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_214616.p1 GENE.S_Transcript_214616~~S_Transcript_214616.p1 ORF type:complete len:109 (+),score=7.52,zf-RVT|PF13966.2|2.2e-13 S_Transcript_214616:741-1067(+)
ATGTTGAAAAAGATAGTGGAGATGAGAGATATAAATGTTGGGATCCTAGGGGCTATTAAAAAGACCAGCATGAAGATAAAATGCTTCTATGATCAGCTAAATAGTGTTGGAGCTAAAGTGCCCTGGTACCAACTGGTATGGATAAGTTATGCTAGGCCAAGAACAAAAGTCATCCTTTGGCTGTGGCTACTGCAGGAGCTCCTTACTAAATACAAATTAGCATACTGGAATCTGAACTGTGAACTCATTTGTCCCCTGTGTAAAGTTGAGAATGAGAGCTGTCAGCATATTCTAATTAATAGCCCTTACTCTCAAGAGGTTTTCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_214616.p1 GENE.S_Transcript_214616~~S_Transcript_214616.p1 ORF type:complete len:109 (+),score=7.52,zf-RVT|PF13966.2|2.2e-13 S_Transcript_214616:741-1067(+)
MLKKIVEMRDINVGILGAIKKTSMKIKCFYDQLNSVGAKVPWYQLVWISYARPRTKVILWLWLLQELLTKYKLAYWNLNCELICPLCKVENESCQHILINSPYSQEVF*

Click here to download the sequence:
Link to NCBI Protein BLAST