Transcript Information: S_Transcript_215155.p1


Annotated TAIR IDAT4G31880.1
Annotated Gene NameLOCATED IN: cytosol, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: Tudor/PWWP/MBT superfamily protein (TAIR:AT1G15940.1); Has 137162 Blast hits to 70781 proteins in 2973 species: Archae - 289; Bacteria - 24182; Metazoa - 56725; Fungi - 20130; Plants - 6559; Viruses - 758; Other Eukaryotes - 28519 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:15419435-15423939 | Reverse length=873
E-Value4E-08
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 19.7997333068174
Replicate 28.2038531567654
Replicate 37.9230526857345
Condition 2: 8 Hour
Replicate 16.6978662728901
Replicate 26.8650077053313
Replicate 37.2335367323763
Condition 3: 24 Hour
Replicate 18.4382762942006
Replicate 27.5273309206641
Replicate 39.0143768812509


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_215155.p1 GENE.S_Transcript_215155~~S_Transcript_215155.p1 ORF type:3prime_partial len:277 (-),score=100.98 S_Transcript_215155:3-830(-)
ATGATTATAGCAAGGTTGTTGCAAATGTTTGCCAAACAGGAACTGAAGCTGTTGAGCCTGGTGATGAGGATGCTGCAAGAAAAAATTTTGGCTGACGGAAGTGAGTTGGCCAACCCACCTCAAGAAAAGGCAGTTGAGGTAGCTATGGGAACACTAGATGATGCGCCTCCTTCTGAGGATGTGGGTCCAACAACAGTTCCATCCCCAAAGTCTGTTATGAGCAATGGTAGCCTCCAGAAGGAGATTGAGGACACATCAGCAGGTAATGATAATACGAAGGAGGCCGATCATGATACTCATGATCAGGTTAAAGCTGATTTAGAGCCGGACAAGACTAATGCTGGGAGTTTGGATGCTGAAGAACCAGAAAAGTTGCATTCTAAGCCCGAAAAGTCTAACCGTAGAAAAGGGAGGAAAACAACTGCTTTGAAGAGCTCACCAGAACCTTCTGAGCCTTCCCTTCCGGATGATATGAAGGAGTCAGTAAAGGTGTCTGGCCCTCAAGAGAAAGATGGCAGGGATGTTGACAGTGTTGTAAATGAGGATGCTGTGGCTGCTGCTGCAGAACCTTCTGAAAATGAGAAAGAGTCTAACCCTCCAATTTCCTCGCCAAAGACATCAGATAATGAGCCCGACCATGCATCCTCCCCGTCAATGAGTGAAACCCTTGCTGATGAAATTCGTTCTAAGAAGGCTGGGCGAGCAAAGAAGAAAGATGACCTGGTGCAACCAAGTGAGCCAGTAGGTGATGTGGATTCTAAGAAGGAATCTGATACAAAGAAGACACCGGAAGAATCTGGCATTCCAGAGTCCAAATTGCATAAGCGC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_215155.p1 GENE.S_Transcript_215155~~S_Transcript_215155.p1 ORF type:3prime_partial len:277 (-),score=100.98 S_Transcript_215155:3-830(-)
MIIARLLQMFAKQELKLLSLVMRMLQEKILADGSELANPPQEKAVEVAMGTLDDAPPSEDVGPTTVPSPKSVMSNGSLQKEIEDTSAGNDNTKEADHDTHDQVKADLEPDKTNAGSLDAEEPEKLHSKPEKSNRRKGRKTTALKSSPEPSEPSLPDDMKESVKVSGPQEKDGRDVDSVVNEDAVAAAAEPSENEKESNPPISSPKTSDNEPDHASSPSMSETLADEIRSKKAGRAKKKDDLVQPSEPVGDVDSKKESDTKKTPEESGIPESKLHKR

Click here to download the sequence:
Link to NCBI Protein BLAST