Transcript Information: S_Transcript_215280.p1


Annotated TAIR IDAT1G34150.1
Annotated Gene NamePseudouridine synthase family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:12436086-12439237 | Forward length=446
E-Value2E-61
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.645616607559
Replicate 23.425273264637
Replicate 32.6948290167818
Condition 2: 8 Hour
Replicate 14.6740581517004
Replicate 23.1667913599613
Replicate 32.4333159366417
Condition 3: 24 Hour
Replicate 12.1944631817035
Replicate 22.8976562746015
Replicate 33.109567118439


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_215280.p1 GENE.S_Transcript_215280~~S_Transcript_215280.p1 ORF type:complete len:219 (-),score=36.95,PseudoU_synth_1|PF01416.16|1.5e-17,PseudoU_synth_1|PF01416.16|1.6e+03 S_Transcript_215280:160-816(-)
ATGCAGAATGCTGGCAAGAAATATCTAGGTGAGCATGACTTCAGGAACTTCTGTAAAATGGATGCAGTCAATTTGCACAACTACAAGCGGTGTGTCACATCATTTGATATAATTCCGAGCTATGAGCGATATAGAGGCAAAGAACTATGTGTCATCAAAATTAGAGGTAGTGCATTCCTGTGGCACCAGGTCCGATGTATGGTTGCTGTACTGTTTATGATTGGCCAAGGTCTGGAATCTGAAGATATTATAGATGTATTACTGGATATTGAGAGAACGCCTAGAAAGCCTCAATACATGATGGCCTCGGAAATGCCACTGGTTCTTCACTCTTGTGAATTCAGAGGTCTGCAGTTCTCTAGTTCAACAGGTGCTAGGCAGGCATTGAGTGTGCATCTTGAGAATGAATGTCAAAATCTCATACTCCAAGCTGCCATCTATCGTGAGGCTTTGGACAGTTGTTCATCTACGGAATATGGTGTTGGAAAGGGTTCACCTAAGAAAGAAACAGTCAAGAAGTCTCTCCATGTTCCTTTGATGAGACGACCAACTGAGCCATCATATGAGGAGCGGCGTGCCAAATTGAACTCGAGAGGGCTCGACCAAGGTTTTGCTGAATTATCCCTAGGAACAAAGGCACCAAAAAATAAAGGATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_215280.p1 GENE.S_Transcript_215280~~S_Transcript_215280.p1 ORF type:complete len:219 (-),score=36.95,PseudoU_synth_1|PF01416.16|1.5e-17,PseudoU_synth_1|PF01416.16|1.6e+03 S_Transcript_215280:160-816(-)
MQNAGKKYLGEHDFRNFCKMDAVNLHNYKRCVTSFDIIPSYERYRGKELCVIKIRGSAFLWHQVRCMVAVLFMIGQGLESEDIIDVLLDIERTPRKPQYMMASEMPLVLHSCEFRGLQFSSSTGARQALSVHLENECQNLILQAAIYREALDSCSSTEYGVGKGSPKKETVKKSLHVPLMRRPTEPSYEERRAKLNSRGLDQGFAELSLGTKAPKNKG*

Click here to download the sequence:
Link to NCBI Protein BLAST