Transcript Information: S_Transcript_215288.p1


Annotated TAIR IDAT5G08540.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast, chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:2763914-2765431 | Forward length=346
E-Value6.9E-73
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 120.534723175294
Replicate 222.062789557515
Replicate 320.150396832082
Condition 2: 8 Hour
Replicate 120.27228462246
Replicate 224.305218275259
Replicate 319.07899939952
Condition 3: 24 Hour
Replicate 117.934379655858
Replicate 218.606709504038
Replicate 320.239912176945


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_215288.p1 GENE.S_Transcript_215288~~S_Transcript_215288.p1 ORF type:complete len:162 (-),score=40.13 S_Transcript_215288:90-575(-)
ATGGAGGAAATTCTGCGGAAATACATTCGTTATGCATTGAATGAGAAACCTTTCAATGGAGACTTGGTTGCAGATTTAATTCAACTAAGGAAAGCCTCGATGTTGACTGATTCCCAGGTTGCTGAAATTTTAAATGAAATCTCGAGGCGAATTGTGAAAGACAAAGGTCCTGTTGTCATGGATGCATCTGGTTATTCTGAGAAGGGTTTCAAGAGAAAACTTGCTGTGCAGGCTCTATTTGGAAAGGTTTTCTATCTATCTGAGCTGCCAGAGTTTTGTTCAAGGGACAGCTCTTTAATTGTGAAGGAAATATTTGGGGTCACAGATGAAGATGCAGACAAACAACGGATACACACCCTCTCTAATATAGGGGACATGGACGCCCTTGAGATTATGTTTGAAGATGGGCCTGGTTTAGGAGATTCCCATATGTTTAAAGATACTTCTGGTGATGTTGGGATTCGACGATGTAGGGGATTCTACTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_215288.p1 GENE.S_Transcript_215288~~S_Transcript_215288.p1 ORF type:complete len:162 (-),score=40.13 S_Transcript_215288:90-575(-)
MEEILRKYIRYALNEKPFNGDLVADLIQLRKASMLTDSQVAEILNEISRRIVKDKGPVVMDASGYSEKGFKRKLAVQALFGKVFYLSELPEFCSRDSSLIVKEIFGVTDEDADKQRIHTLSNIGDMDALEIMFEDGPGLGDSHMFKDTSGDVGIRRCRGFY*

Click here to download the sequence:
Link to NCBI Protein BLAST