Transcript Information: S_Transcript_215289.p1


Annotated TAIR IDAT5G08540.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast, chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:2763914-2765431 | Forward length=346
E-Value6.3E-51
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.6532503087951
Replicate 25.0560559402638
Replicate 37.0441005874863
Condition 2: 8 Hour
Replicate 18.737486310492
Replicate 28.5448032998956
Replicate 38.8816031687422
Condition 3: 24 Hour
Replicate 15.0061191332612
Replicate 28.1841541803477
Replicate 35.4297456705458


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_215289.p1 GENE.S_Transcript_215289~~S_Transcript_215289.p1 ORF type:complete len:144 (-),score=49.58 S_Transcript_215289:150-581(-)
ATGTTCAAGAAAGGTAGAGAGGAACTTCAGCATTCATCATTACTGGATCTTGTGAAAAAGGTTGCTGAAATTTTAAATGAAATCTCGAGGCGAATTGTGAAAGACAAAGGTCCTGTTGTCATGGATGCATCTGGTTATTCTGAGAAGGGTTTCAAGAGAAAACTTGCTGTGCAGGCTCTATTTGGAAAGGTTTTCTATCTATCTGAGCTGCCAGAGTTTTGTTCAAGGGACAGCTCTTTAATTGTGAAGGAAATATTTGGGGTCACAGATGAAGATGCAGACAAACTACGAATCCATACCCTCTCTGATGTAGGGGACATGGAAGCCCTTGAGAGGATGGCTGAAGGTGGGTCTGGTTTAGGAGATTCCCAGACGTTTGAAGACACTTCTGGTGATGTTGGATTTGACGATGTAGGAGATTCTAGTGAATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_215289.p1 GENE.S_Transcript_215289~~S_Transcript_215289.p1 ORF type:complete len:144 (-),score=49.58 S_Transcript_215289:150-581(-)
MFKKGREELQHSSLLDLVKKVAEILNEISRRIVKDKGPVVMDASGYSEKGFKRKLAVQALFGKVFYLSELPEFCSRDSSLIVKEIFGVTDEDADKLRIHTLSDVGDMEALERMAEGGSGLGDSQTFEDTSGDVGFDDVGDSSE*

Click here to download the sequence:
Link to NCBI Protein BLAST