Transcript Information: S_Transcript_21537.p1


Annotated TAIR IDAT1G24190.1
Annotated Gene NameSIN3-like 3
Annotated Gene Symbol(s)SIN3, ATSIN3, SNL3
Annotation TypeOrtholog
Chromosome Positionchr1:8563858-8569927 | Reverse length=1330
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 18.6072505807763
Replicate 29.0875014276058
Replicate 39.3751689591037
Condition 2: 8 Hour
Replicate 110.08278062855
Replicate 210.820901408773
Replicate 310.155556110568
Condition 3: 24 Hour
Replicate 19.8848493822558
Replicate 28.8584441186738
Replicate 310.571676335139


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_21537.p1 GENE.S_Transcript_21537~~S_Transcript_21537.p1 ORF type:complete len:1379 (+),score=383.10,Sin3a_C|PF16879.1|4.6e+02,Sin3a_C|PF16879.1|4.5e-59,PAH|PF02671.17|2.2e-16,PAH|PF02671.17|1.6e-16,PAH|PF02671.17|4.4e-13,Sin3_corepress|PF08295.8|8.4e-37 S_Transcript_21537:603-4139(+)
ATGCCTGGTCAACATGCTCCATCTGGCCGGAATTCTACCTTCAGGGACAGGAACTCAGCGATGCCCACAAGGCCCATGCATGCTGACAGGAAGGACCGTGATTTTGCTGTTGATGGTTCTGATGCCGACAATGAGAAATTAATGAAAGCAGAGCGAGAGCAGAGGCGGAGGGAAAGAGACAAGAGAGACAGGGCTGAAGACTCTGCTGATCATGGAGAAGGTGCTGAAAATCATGAAACACGTGGTGTGTCTTGCTTTTATGATGATAAGAATGCTTTGAAAAGTATTTACAGCCATGAATATGCATTCTGTGAAAAAGTAAAGGACAGAGTAGAGAAGCCTGATGATTATCAGGAATTTTTGAAATGCCTTCACATATACAGCAGGGAGATAATTACAAGACAAGAACTGCATGCTCTGGTGTCTGATCTGCTTAGAGGGTATCCAGATCTTATGGATGGTTTCGAAGAATTCCTGGCACGCTGTGAGAGAACTGATGGATTTCTTGGTAGTGTTATGAGTAAAAAGTCCTTGTGGCCAGAATCCTTTTGGAGTGATGGTTGTCCTTCAAAACCTGTGAAAACTGAGGACAGAGAACGAGATCATGATCGGGAACATGGGAGAGATGATAGAGAACGTGATAACAGAGAACGAGATCGCTCTGATAGAAGTGTTGTTTATATGAATAAAGAGCTTGCTGGTCTCAGGATGAGTTCAAATTCAAACAAGGATAGGTATATTGGAAAGCCAATCCAAGAGCTTGACCTCACGAATTGTGAACGCTGCACCCCTAGTTATCGACTTCTTCCCAAAAATTACTCCATACCTATGGCAAGTCAGAGGACCGAACTTGGAGCTGAAGTACTGAATGATCATTGGGTCTCTGTCACCTCTGGAAGTGAGGACTACTCTTTCAAGCACATGCGGAAAAATCAGTATGAGGAGAGCCTCTTTCGCTGTGAAGATGACAGGTTTGAGCTAGACATGCTTTTAGAGTCTGTGAATGTTACAATCAAGCGTGTGGAGGACCTTCTAGAAAAAATAAACACCAATATGATAAACACAGAAAGTCCAATCCGCATTGAGGAGCACTTTACAGCTATAAATCTGAGATGCATTGAGCGATTGTATGGTGACCATGGACTTGATGTTATGGATGTGCTAAGGAAAAATGCAACTCTTGCTTTGCCAGTTATATTGACTCGCTTGAAACAGAAACAAGAAGAGTGGGCTAGATGCCGTGCTGATTTCAATAAGGTGTGGGCTGAAATTTATGCGAAGAACTATCACAAATCACTTGATCATCGTAGCTTTTACTTTAAGCAGCAGGATACAAAGAGCTTGAGCACAAAAGCTTTATTGGCAGAGGTTAAGGAAATCAGTGAGCAGAAGTGCAAAGATGATGATGTGCTTCATGCTATTGCTGCCGGAAATAGACGATCAATCACTCCCCATATGGAATTTGAGTACCCTGATCCAGAGATACATGAAAATTTATACCAATTGATGAAGTACTCCTGTGGAGAAGTTTGTACAGCTGACCAGCTGGATAAAGTGATGAAGATATGGACAACCTTCCTGGAACCCTTGCTTGGTGTTCCTGTGAGAGCTCAGGGTGCAGAGGACTCAGAGGATGATGTGAGAGCCAAGAATGAGACTGCTAAAGGTGATGGTCCAGCTGTTGTTGAGAGTGACGGAAGTCCTAGCGTCTGTGCTACTACTCGCAAACAACCAAATCAGTCCAGAAATGGAGATGAAGGTAGTCTGCCAGAACAATCCAGTTCTGGCAATCATGCCAAAGAAGATGGATGTCCTGAGGGTAATAGTAATGCTCTGCATCAGGCTAGAGCACAGGGTAATGGAATTGTGACTGATCAAGTATGTGGTCCTACTTCTAATGACCGTCTGACCAGCTCAAATGTGCCACTTTCATCTGGAGCTGAGCAATTTAATGGAAGGAATACTGAAAATGCATCAGGTCACAGTACAATGCCATCCAGGCCTGGGACTACAGCAGATAACAGCAGCCTTGACCTGAGGTCCAATGGTGGAAATTTACCTTCATTGGAGGCTGTAGATTCAGCAAGACCAGTTGCACCATCAAATGGGGCAATGACAGGAGCCAACAAAGATATAAGATACTGTGAGGAGTCTAATGGGCATATGAAAGTTGAAAGGGAGGAGGGTGAGTTGTCTCCAAATGGAGATTTTGAGGAGGACAATTTTGCAGTGTATGGTGATGCAGCTGGAGAGCATGCAAATAAACGAGATGTTGCTGCAAGTGTCCCACATCAAAGTAGACAACGGGGTGATGTACACCATCGTGCTGCTGGGAGAGAAAATGATGGAGATGCTGATGATGAAGGTGACGAGAGCGCTCACAGGACATCGGAAGAAAGTGAGAATGCTTCAGAGAATGGGGATGCTTCTGGAAGCGAGTCTGGTGATGGTGAGGATCGCTCCCCGGAGCATGAAGATGGGGACCATGACGACAATGGCAATAAGGCTGAGAGTGAGGGTGAGGCTGAAGGAATGGAAGATGGACATGAAGATGGAGATGGGACATCATTGCCACTTTCAGAGCGTTTTCCGCAAACTGTGAAACCTCTTGCCAAGCATGTTCCTGCTCCCTTAAATGAAGCAGCAAAAGGGAGCCGTGTTTTCTATGGAAATGATTCCTTCTATGTGCTCCTTAGGCTTCATCAAACTTTGTATGAAAGAATACAATCAGCAAAGATTAATTCATCATCAGCTGAAAGGAGATGGAAGTCATCCAATGACGCGCTTCCTGCTGATCTGTATTCAAGGTTCATGAATGCTCTTTACAGTTTGGTTGATGGAACTTCTGACAACACTAAATTTGAAGATGATTGCCGAGCTATTGTTGGTACTCAGTCATATGTTCTGTTCACTTTGGACAAGCTCATATATAAGCTTGTGAAACAGCTCCAAAATTTACTTACTGATGAGATGGACAACAAGCTTCTTCAGCTATATGCATATGAAAGTTCAAGGAAACATGGGAGATTCTTCGATGTGGTTTATCACGAAAATGCCCGTGTTCTTCTCCATGATGAGAACATTTATCGTATTGAATGTCAGTCATCCTCACCTACTCGGTTGTCCATTCAATTGATGGAGAAGGGGAACGACAAGCCAGAAGTGACTGTCGTTTCAATGGACCCTAACTTTGCAACCTATCTTCATAACGACTTTCTTTCAGTTGTCCCAGACAAGAAAGAGAAGCCTGGGATTTTCTTGAAGAGGAATAAACGCAAATCTGCGAGCGGAGATGAAATCTCTAGTGCCTCACAGGTGATGGAAGGAGTACAAGTTGTCAATGGTCTCGAGTGTAAGATAGCTTGCACCTCATCCAAGGTGTCTTATGTATTAGATACGGAAGACTTCTTGTACCGGAATAGGAAGAGGAGGAGAACTTTGCATGTGAGCAACGGATGCCATGACCAAGCAAAGTCATCATCAAATGGCTCTTCACGCAGAGTAGAACGATTCCACAGATTACTTGCAAGCTCATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_21537.p1 GENE.S_Transcript_21537~~S_Transcript_21537.p1 ORF type:complete len:1379 (+),score=383.10,Sin3a_C|PF16879.1|4.6e+02,Sin3a_C|PF16879.1|4.5e-59,PAH|PF02671.17|2.2e-16,PAH|PF02671.17|1.6e-16,PAH|PF02671.17|4.4e-13,Sin3_corepress|PF08295.8|8.4e-37 S_Transcript_21537:603-4139(+)
MPGQHAPSGRNSTFRDRNSAMPTRPMHADRKDRDFAVDGSDADNEKLMKAEREQRRRERDKRDRAEDSADHGEGAENHETRGVSCFYDDKNALKSIYSHEYAFCEKVKDRVEKPDDYQEFLKCLHIYSREIITRQELHALVSDLLRGYPDLMDGFEEFLARCERTDGFLGSVMSKKSLWPESFWSDGCPSKPVKTEDRERDHDREHGRDDRERDNRERDRSDRSVVYMNKELAGLRMSSNSNKDRYIGKPIQELDLTNCERCTPSYRLLPKNYSIPMASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTIKRVEDLLEKINTNMINTESPIRIEEHFTAINLRCIERLYGDHGLDVMDVLRKNATLALPVILTRLKQKQEEWARCRADFNKVWAEIYAKNYHKSLDHRSFYFKQQDTKSLSTKALLAEVKEISEQKCKDDDVLHAIAAGNRRSITPHMEFEYPDPEIHENLYQLMKYSCGEVCTADQLDKVMKIWTTFLEPLLGVPVRAQGAEDSEDDVRAKNETAKGDGPAVVESDGSPSVCATTRKQPNQSRNGDEGSLPEQSSSGNHAKEDGCPEGNSNALHQARAQGNGIVTDQVCGPTSNDRLTSSNVPLSSGAEQFNGRNTENASGHSTMPSRPGTTADNSSLDLRSNGGNLPSLEAVDSARPVAPSNGAMTGANKDIRYCEESNGHMKVEREEGELSPNGDFEEDNFAVYGDAAGEHANKRDVAASVPHQSRQRGDVHHRAAGRENDGDADDEGDESAHRTSEESENASENGDASGSESGDGEDRSPEHEDGDHDDNGNKAESEGEAEGMEDGHEDGDGTSLPLSERFPQTVKPLAKHVPAPLNEAAKGSRVFYGNDSFYVLLRLHQTLYERIQSAKINSSSAERRWKSSNDALPADLYSRFMNALYSLVDGTSDNTKFEDDCRAIVGTQSYVLFTLDKLIYKLVKQLQNLLTDEMDNKLLQLYAYESSRKHGRFFDVVYHENARVLLHDENIYRIECQSSSPTRLSIQLMEKGNDKPEVTVVSMDPNFATYLHNDFLSVVPDKKEKPGIFLKRNKRKSASGDEISSASQVMEGVQVVNGLECKIACTSSKVSYVLDTEDFLYRNRKRRRTLHVSNGCHDQAKSSSNGSSRRVERFHRLLASS*

Click here to download the sequence:
Link to NCBI Protein BLAST