Transcript Information: S_Transcript_21542.p1


Annotated TAIR IDAT1G24190.1
Annotated Gene NameSIN3-like 3
Annotated Gene Symbol(s)SIN3, ATSIN3, SNL3
Annotation TypeOrtholog
Chromosome Positionchr1:8563858-8569927 | Reverse length=1330
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 112.009730144761
Replicate 213.733553815872
Replicate 314.135652854243
Condition 2: 8 Hour
Replicate 115.689795509884
Replicate 217.147167570221
Replicate 316.768217255543
Condition 3: 24 Hour
Replicate 116.493941880519
Replicate 215.022983090555
Replicate 316.098706130395


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_21542.p1 GENE.S_Transcript_21542~~S_Transcript_21542.p1 ORF type:5prime_partial len:1139 (+),score=332.28,PAH|PF02671.17|1.7e-16,PAH|PF02671.17|1.3e-16,PAH|PF02671.17|9.9e-13,Sin3_corepress|PF08295.8|6.6e-37,Sin3a_C|PF16879.1|3.5e+02,Sin3a_C|PF16879.1|4.3e-07 S_Transcript_21542:3-3419(+)
CAACTCAAGAGACCTCAACCTGTTGTTGCTTATCGAGGCGAGACTTCGGGTCAGCTTCAACCAGGAGGAGGAGGAGGTGGTGGTGGTGGCAGTGAAGGTGGCACCAGGGCAGCCAGTGGTCAGAGATTAACTACCAATGATGCCCTAGCTTATCTGAAGGCTGTGAAGGAGATGTTCCAGGACAAGAAAGAGAAATATGATGAGTTTCTAGAAGTTATGAAGGATTTCAAAGCTCAAAGAATTGACACTACTGGTGTGATAGCGAGGGTTAAAGAGTTATTCAAAGGGCATCGTAACCTAATCTTAGGTTTTAATACCTTCTTGCCGAAGGGATATGAAATCACGCTTCCTCCGGAGGATGATCAACCTCCTGCAAAGAAGCATGTGGAATTTGAAGAAGCAATCAATTTTGTCAACAAAATTAAGATGCGGTTTCAAGGTGATGATCGTGTTTACAAGTCATTCCTTGACATTTTGAATATGTATCGGAAAGAAAGCAAGTCAATAAGTGAAGTCTACCTGGAGGTTGCTGCTCTCTTTCGAGACCACAAGGACCTTCTTGAGGAATTCACCCATTTTCTTCCTGATACATCACCAGCAATGCCTGGTCAACATGCTCCATCTGGCCGGAATTCTACCTTCAGGGACAGGAACTCAGCGATGCCCACAAGGCCCATGCATGCTGACAGGAAGGACCGTGATTTTGCTGTTGATGGTTCTGATGCCGACAATGAGAAATTAATGAAAGCAGAGCGAGAGCAGAGGCGGAGGGAAAGAGACAAGAGAGACAGGGCTGAAGACTCTGCTGATCATGGAGAAGGTGCTGAAAATCATGGAACACGTGGTGTCTCTTGCTCTTATGATGATAAGAATGCGTTGAAAAGTATTTACAGCCATGAATATGCATTCTGTGAAAAAGTAAAGGACAGAGTAGAGAAGCCTGATGATTATCAGGAATTTTTGAAATGCCTTCACATATACAGCAGGGAGATAATCACAAGACAAGAACTGCATTCTCTGGTGTCTGATCTGATTAGAGGGTATCCAGATCTTATGGATGGTTTCGAAGAATTCCTGGCACGCTGTGAGAGAACTGATGGATTTCTTGGTAGTGTTATGAGTAAAAAGTCCTTGTGGCCAGAATCCTTTTGGAGTGATGGTTGTCCTTCAAAACCTGTGAAAACTGAGGACAGAGAACGAGATCATGATCGGGAACATGGGAGAGATGATAGAGAACGTGATAACAGAGAACGAGATCGCTCTGATAGAAGTGTTGTTTATATGAATAAAGAGCTTGCTGGTCTCAGGATGAGTTCAAATTCAAACAAGGATAAGTATATTGGAAAGCCAATTCAAGAGCTTGACCTCTCGAACTGTGAACGCTGCACCCCTAGTTATCGACTTCTTCCCAAAAATTACTCCATACCTATGGCAAGTCAGAGGACCGAACTTGGAGCTGAAGTACTGAATGATCATTGGGTCTCTGTCACCTCTGGAAGTGAGGACTACTCTTTCAAGCACATGCGGAAAAATCAGTATGAGGAGAGCCTCTTTCGCTGTGAAGATGACAGGTTTGAGCTAGACATGCTTTTAGAGTCTGTGAATGTTACAATCAAGCGTGTGGAGGACCTTCTAGAAAAAATAAACACCAATATGATAAACACAGAAAGTCCAATCCGCATTGAGGAGCACTTTACAGCTATAAATCTGAGATGCATTGAGCGATTGTATGGTGACCATGGACTTGATGTTATGGATGTGCTAAGGAAAAATGCAACTCTTGCTTTGCCAGTTATATTGACTCGCTTGAAACAGAAACAAGAAGAGTGGGCTAGATGCCGTGCTGATTTCAATAAGGTGTGGGCTGAAATTTATGCGAAGAACTATCACAAATCACTTGATCATCGTAGCTTTTACTTTAAGCAGCAGGATACAAAGAGCTTGAGCACAAAAGCTTTATTGGCAGAGGTTAAGGAAATCAGTGAGCAGAAGTGCAAAGATGATGATGTGCTTCATGCTATTGCTGCCGGAAATAGACGATCAATCACTCCCCATATGGAATTTGAGTACCCTGATCCAGAGATACATGAAAATTTATACCAATTGATGAAGTACTCCTGTGGAGAAGTTTGTACAGCTGACCAGCTGGATAAAGTGATGAAGATATGGACAACCTTCCTGGAACCCTTGCTTGGTGTTCCTGTGAGAGCTCAGGGTGCAGAGGACTCAGAGGATGATGTGAGAGCCAAGAATGAGACTGCTAAAGGTGATGGTCCAGCTGTTGTTGAGAGTGACGGAAGTCCTAGCGTCTGTGCTACTACTCGCAAACAACCAAATCAGTCCAGAAATGGAGATGAAGGTAGTCTGCCAGAACAATCCAGTTCTGGCAATCATGCCAAAGAAGATGGATGTCCTGAGGGTAATAGTAATGCTCTGCATCAGGCTAGAGCACAGGGTAATGGAATTGTGACTGATCAAGTATGTGGTCCTACTTCTAATGACCGTCTGACCAGCTCAAATGTGCCACTTTCATCTGGAGCTGAGCAATTTAATGGAAGGAATACTGAAAATGCATCAGGTCACAGTACAATGCCATCCAGGCCTGGGACTACAGCAGATAACAGCAGCCTTGACCTGAGGTCCAATGGTGGAAATTTACCTTCATTGGAGGCTGTAGATTCAGCAAGACCAGTTGCACCATCAAATGGGGCAATGACAGGAGCCAACAAAGATATAAGATACTGTGAGGAGTCTAATGGGCATATGAAAGTTGAAAGGGAGGAGGGTGAGTTGTCTCCAAATGGAGATTTTGAGGAGGACAATTTTGCAGTGTATGGTGATGCAGCTGGAGAGCATGCAAATAAACGAGATGTTGCTGCAAGTGTCCCACATCAAAGTAGACAACGGGGTGATGTACACCATCGTGCTGCTGGGAGAGAAAATGATGGAGATGCTGATGATGAAGGTGACGAGAGCGCTCACAGGACATCGGAAGAAAGTGAGAATGCTTCAGAGAATGGGGATGCTTCTGGAAGCGAGTCTGGTGATGGTGAGGATCGCTCCCCGGAGCATGAAGATGGGGACCATGACGACAATGGCAATAAGGCTGAGAGTGAGGGTGAGGCTGAAGGAATGGAAGATGGACATGAAGATGGAGATGGGACATCATTGCCACTTTCAGAGCGTTTTCCGCAAACTGTGAAACCTCTTGCCAAGCATGTTCCTGCTCCCTTAAATGAAGCAGCAAAAGGGAGCCGTGTTTTCTATGGAAATGATTCCTTCTATGTGCTCCTTAGGCTTCATCAAACTTTGTATGAAAGAATACAATCAGCAAAGATTAATTCATCATCAGCTGAAAGGAGATGGAAGTCATCCAATGACGCGCTTCCTGCTGATCTGTATTCAAGGTTCGTCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_21542.p1 GENE.S_Transcript_21542~~S_Transcript_21542.p1 ORF type:5prime_partial len:1139 (+),score=332.28,PAH|PF02671.17|1.7e-16,PAH|PF02671.17|1.3e-16,PAH|PF02671.17|9.9e-13,Sin3_corepress|PF08295.8|6.6e-37,Sin3a_C|PF16879.1|3.5e+02,Sin3a_C|PF16879.1|4.3e-07 S_Transcript_21542:3-3419(+)
QLKRPQPVVAYRGETSGQLQPGGGGGGGGGSEGGTRAASGQRLTTNDALAYLKAVKEMFQDKKEKYDEFLEVMKDFKAQRIDTTGVIARVKELFKGHRNLILGFNTFLPKGYEITLPPEDDQPPAKKHVEFEEAINFVNKIKMRFQGDDRVYKSFLDILNMYRKESKSISEVYLEVAALFRDHKDLLEEFTHFLPDTSPAMPGQHAPSGRNSTFRDRNSAMPTRPMHADRKDRDFAVDGSDADNEKLMKAEREQRRRERDKRDRAEDSADHGEGAENHGTRGVSCSYDDKNALKSIYSHEYAFCEKVKDRVEKPDDYQEFLKCLHIYSREIITRQELHSLVSDLIRGYPDLMDGFEEFLARCERTDGFLGSVMSKKSLWPESFWSDGCPSKPVKTEDRERDHDREHGRDDRERDNRERDRSDRSVVYMNKELAGLRMSSNSNKDKYIGKPIQELDLSNCERCTPSYRLLPKNYSIPMASQRTELGAEVLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTIKRVEDLLEKINTNMINTESPIRIEEHFTAINLRCIERLYGDHGLDVMDVLRKNATLALPVILTRLKQKQEEWARCRADFNKVWAEIYAKNYHKSLDHRSFYFKQQDTKSLSTKALLAEVKEISEQKCKDDDVLHAIAAGNRRSITPHMEFEYPDPEIHENLYQLMKYSCGEVCTADQLDKVMKIWTTFLEPLLGVPVRAQGAEDSEDDVRAKNETAKGDGPAVVESDGSPSVCATTRKQPNQSRNGDEGSLPEQSSSGNHAKEDGCPEGNSNALHQARAQGNGIVTDQVCGPTSNDRLTSSNVPLSSGAEQFNGRNTENASGHSTMPSRPGTTADNSSLDLRSNGGNLPSLEAVDSARPVAPSNGAMTGANKDIRYCEESNGHMKVEREEGELSPNGDFEEDNFAVYGDAAGEHANKRDVAASVPHQSRQRGDVHHRAAGRENDGDADDEGDESAHRTSEESENASENGDASGSESGDGEDRSPEHEDGDHDDNGNKAESEGEAEGMEDGHEDGDGTSLPLSERFPQTVKPLAKHVPAPLNEAAKGSRVFYGNDSFYVLLRLHQTLYERIQSAKINSSSAERRWKSSNDALPADLYSRFV*

Click here to download the sequence:
Link to NCBI Protein BLAST