Transcript Information: S_Transcript_215597.p1


Annotated TAIR IDAT5G13930.1
Annotated Gene NameChalcone and stilbene synthase family protein
Annotated Gene Symbol(s)CHS, TT4, ATCHS
Annotation TypeOrtholog
Chromosome Positionchr5:4488762-4490035 | Forward length=395
E-Value3E-142
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.6227439777549
Replicate 20.35874454565065
Replicate 30.674734246961
Condition 2: 8 Hour
Replicate 10.69350862819945
Replicate 20
Replicate 30.95314765713331
Condition 3: 24 Hour
Replicate 10.17760067878532
Replicate 20.55277589210603
Replicate 30.82022908634524


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_215597.p1 GENE.S_Transcript_215597~~S_Transcript_215597.p1 ORF type:3prime_partial len:246 (+),score=8.73,Chal_sti_synt_N|PF00195.15|8.9e-114,ACP_syn_III|PF08545.6|5e-07,FAE1_CUT1_RppA|PF08392.8|3.2e-07 S_Transcript_215597:96-830(+)
ATGACATCAGTACAAGAAATATGTGCCGCCCAAAAAGCCTGTGGCCCGGCCACAATCCTGGCAATTGGGACAGCAAACCCAGTGAATGAGATGTACCAGGCTGATTATCCTGACTTCTATTTTCGTGTCACTAACAGCGACCATATGACTGATCTCAAGCACAAGTTCAGGCGCATGTGCGAAAGATCCATGATCAAGAAGCGTTACATGCACCTAAATGAAGATCTCCTAAAAGAGAATCCTCATTTATGCGACTACAACGCCTCATCCTTAGACACCCGCCAAGACATCCTCATCACTGAGGTCCCCAAGCTCGGCAAACAGGCCGCCGTCAAGGCCATCAAGGAGTGGGGCCAACCCCGTTCCAAGATCACCCACGTCATCTTCTGCACCACCTCCGGCCTCGACATGCCTGGGGCCGATTACCAGCTCACCAAGCTCCTCGGCCTCCGCCCCGACGTCCGCCGTTTCATGCTCTACCAACAAGGCTGCTACGCTGGCGGCACTGTCCTCCGCCTCGCCAAGGACATCGCCGAAAACAACCGTGGGGCCCGGGTTCTTGTGGTTTGTTCCGAGATCACAGTCATCTGCTTCCGTGGACCCACCGAGACCCACCTCGACTCCATGGTGGGGCAGGCCTTGTTTGGTGACGGAGCCGGAGCGGTGATCGTTGGGGCAGACCCGGATGAGTCCGTAGAGCGGCCCATATTCCAGCTGGTCTCGGCGGCCCAGACA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_215597.p1 GENE.S_Transcript_215597~~S_Transcript_215597.p1 ORF type:3prime_partial len:246 (+),score=8.73,Chal_sti_synt_N|PF00195.15|8.9e-114,ACP_syn_III|PF08545.6|5e-07,FAE1_CUT1_RppA|PF08392.8|3.2e-07 S_Transcript_215597:96-830(+)
MTSVQEICAAQKACGPATILAIGTANPVNEMYQADYPDFYFRVTNSDHMTDLKHKFRRMCERSMIKKRYMHLNEDLLKENPHLCDYNASSLDTRQDILITEVPKLGKQAAVKAIKEWGQPRSKITHVIFCTTSGLDMPGADYQLTKLLGLRPDVRRFMLYQQGCYAGGTVLRLAKDIAENNRGARVLVVCSEITVICFRGPTETHLDSMVGQALFGDGAGAVIVGADPDESVERPIFQLVSAAQT

Click here to download the sequence:
Link to NCBI Protein BLAST