Transcript Information: S_Transcript_21585.p1


Annotated TAIR IDAT1G67560.1
Annotated Gene NamePLAT/LH2 domain-containing lipoxygenase family protein
Annotated Gene Symbol(s)LOX6
Annotation TypeOrtholog
Chromosome Positionchr1:25319926-25324117 | Forward length=917
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.721721006159
Replicate 28.2772678771783
Replicate 37.6658066312402
Condition 2: 8 Hour
Replicate 113.727680406575
Replicate 212.891740039357
Replicate 311.535296747095
Condition 3: 24 Hour
Replicate 19.6105695248768
Replicate 27.126407688649
Replicate 37.0458342670162


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_21585.p1 GENE.S_Transcript_21585~~S_Transcript_21585.p1 ORF type:5prime_partial len:741 (+),score=137.55,Lipoxygenase|PF00305.15|0 S_Transcript_21585:2-2224(+)
AGCAAAGAATTCTATTTGGTTGAAGTTGTTGTACATGGATTCAAGGGTGGACCAACGTTCTTCCCTGCGAATTCATGGATCCATTCTCGCGATGATAATCCTGAAAGCAGAATCATATTCAGAAATCATGCGTATTTGCCATCACAAACACCACCTGGCCTTAAAGACTTGCGAAGAGAGGACTTGCTCTGTCTTCGTGGTAATGGGAAGGGGGAGAGGAAACTACATGAAAGGATTTATGATTATGCTCCTTATAATGATTTGGGTAATCCTGATAAAGATGCTGATCTTGCTAGGCCAGTTCTTGCTGGTCCTGAACGACCTTATCCAAGGCGTTGTCGTAGTGGAAGACCACCAATGAAATCTGCTACGGATTGTGAGAGTAGAATTGAGAAGCCTCATCCAGTATATGTTCCCCGTGATGAGGCTTTCGAGGAGATTAAGCAGGCAACATTTGCTGCTGGAAGGCTGAAAGCTGTCTTGCACAATTTGATACCTCTAATTGCTGCTAGTTTGGCGAGTTCAGACATCCCCTTCCGTGGCTTTTCTGATATAGACCAGCTATATATCGATGGTTTTCTTCTGAAAGAGGAAAACCAATCTGAAAACCCTACCAACATGTTTGTAAACAAGTTTTTGAAGCAAGTTCTCAGCATCAGTGATAGGTTACTGAAGTATGACATTCCTGCTGTTATCAAAAGAGACAGATTTTCGTGGTTGCGGGATAATGAGTTTGCACGACAGGCTTTAGCAGGAGTCAACCCTGTGAACATCGAACTTCTAAAGGAACTCCCAATTATGAGCAAACTCGATCCTGCTATCTATGGCCCCCCTGAGTCTGCAATCACGAAAGAAGTACTTGAGCAAGAATTGTTCGGAATGAGTGTTGATGAGGCTCTCAGAAACAAGAGATTGTTCATAATTGATTACCATGATCTTCTCCTTCCTTTTGTCAACAAGATCAATGAGTTACCAGGGAGGAAAGCATATGCCTCTAGAACAGTTCTGTTCTATACCAAGTGTGGGACTATGAAGCCTATTGCTATCGAGCTTTCACTTCCTCGTACAGATTCGAGCCCTGCTTTCAAGCGAGTTTATACTCACGGGCATGATGCTACTAGCCATTGGATCTGGAAGCTAGCCAAAGCCCACGTTTGTGCTGTCGATGCTGGTGTGCATCAACTAATAAATCACTGGTTAAGGACTCACGCTTGCATGGAGGCATACATAATTGCTACTCATAGACAACTTAGTCAAGTGCATCCTATTTACAAGCTCCTTCATCCACATATGCGGTATACCCTTGAAATCAATGCACTTGCTAGACAGAGCTTGATCAATGGAGGGGGGATCATCGAGTTTTGCTTTACCCCTGGAAAGTATGCCATGGAGATCAGCTCTGCCGCCTACAAGAGCATGTGGAGATTCGACTTGGAGGGTCTCCCAGCAGATTTAGTTCGAAGGGGAATGGCGGAGGAGGATCCTTCGGCACCAAGTGGAGTAAAACTGGTAATCGAAGACTACCCTTATGCCGCAGATGGGCTTCTCATATGGTCCGCGATCAAGGAATGGGTCGAATCCTATGTTGCACACTTCTATCCTGATTCAGGTGCAATCATCTCAGATGTTGAGCTTCAAGAGTGGTGGAAGGAGATTAAGAACAAAGGTCACCCAGAGAAGAAAGACGAACCCTGGTGGCCGAAACTCAACACCAAGGAGGACTTGGTTGGGATACTGACCACAATGATTTGGATTGCATCAGGTCAGCACGCAGCCATAAATTTCGGGCAGTACCCATTTGGAGGGTATGTTCCTAACCGTCCTACACTTGTGAGGAAATTGATTCCTCAAGAAGATGAACCTGAATACGAGAATTTCCTTCTCAACCCGCAAACTACTTTCCTCTCATCTTTGCCATCTAAACTTCAAGCAACAAAAGTGATGGCCGTTCAAGACACTTTGTCTACTCATTCCCCAGACGAGGAGTACTTAGGCGAGGATAGCCACTTGCACAGTCATTGGATCAATGATCAAGAAATCAAAGATAATTTCAAGAGATTTTCATCTCGTTTGAAGGAAATTGATGAGATTATCAAAAAAAGGAACAGGGATTTTCATCTCAGAAATAGATGCGGAGCTGGTGTCCCTCCTTACGAGTTGCTTCTGACAACTTCCGATCCTGGTGTTACAGGTCGCGGTGTTCCTAATAGCATATCTATCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_21585.p1 GENE.S_Transcript_21585~~S_Transcript_21585.p1 ORF type:5prime_partial len:741 (+),score=137.55,Lipoxygenase|PF00305.15|0 S_Transcript_21585:2-2224(+)
SKEFYLVEVVVHGFKGGPTFFPANSWIHSRDDNPESRIIFRNHAYLPSQTPPGLKDLRREDLLCLRGNGKGERKLHERIYDYAPYNDLGNPDKDADLARPVLAGPERPYPRRCRSGRPPMKSATDCESRIEKPHPVYVPRDEAFEEIKQATFAAGRLKAVLHNLIPLIAASLASSDIPFRGFSDIDQLYIDGFLLKEENQSENPTNMFVNKFLKQVLSISDRLLKYDIPAVIKRDRFSWLRDNEFARQALAGVNPVNIELLKELPIMSKLDPAIYGPPESAITKEVLEQELFGMSVDEALRNKRLFIIDYHDLLLPFVNKINELPGRKAYASRTVLFYTKCGTMKPIAIELSLPRTDSSPAFKRVYTHGHDATSHWIWKLAKAHVCAVDAGVHQLINHWLRTHACMEAYIIATHRQLSQVHPIYKLLHPHMRYTLEINALARQSLINGGGIIEFCFTPGKYAMEISSAAYKSMWRFDLEGLPADLVRRGMAEEDPSAPSGVKLVIEDYPYAADGLLIWSAIKEWVESYVAHFYPDSGAIISDVELQEWWKEIKNKGHPEKKDEPWWPKLNTKEDLVGILTTMIWIASGQHAAINFGQYPFGGYVPNRPTLVRKLIPQEDEPEYENFLLNPQTTFLSSLPSKLQATKVMAVQDTLSTHSPDEEYLGEDSHLHSHWINDQEIKDNFKRFSSRLKEIDEIIKKRNRDFHLRNRCGAGVPPYELLLTTSDPGVTGRGVPNSISI*

Click here to download the sequence:
Link to NCBI Protein BLAST