Transcript Information: S_Transcript_21607.p1


Annotated TAIR IDAT3G04870.1
Annotated Gene Namezeta-carotene desaturase
Annotated Gene Symbol(s)ZDS, PDE181, SPC1
Annotation TypeOrtholog
Chromosome Positionchr3:1342842-1346189 | Forward length=558
E-Value2.7E-303
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 117.315668086476
Replicate 221.65497459342
Replicate 321.715384261097
Condition 2: 8 Hour
Replicate 123.8875906325
Replicate 224.398134376042
Replicate 324.34971131216
Condition 3: 24 Hour
Replicate 122.975487442048
Replicate 224.800326161179
Replicate 320.09371744659


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_21607.p1 GENE.S_Transcript_21607~~S_Transcript_21607.p1 ORF type:complete len:541 (+),score=90.16,Amino_oxidase|PF01593.20|2e-06,Amino_oxidase|PF01593.20|1.6e-40,NAD_binding_8|PF13450.2|3.3e-08,DAO|PF01266.20|2.3e-05,DAO|PF01266.20|20 S_Transcript_21607:419-2041(+)
ATGGCGGCATCAGTCTTTTTTCCGGCGAACTCAGCCGCCGGAATTCTTCACCGGCGGTCGGATTCTCGGCAAAACGGTCGCCGTCTTTGTCGTGTGCGGTGCTCCTTAGACAGCCTCGATACTGCTGTTTCCGATATGAGCTCTAACGCTCCAAAGGGATTATTTCCTCCAGAACCTGAACTCTACAAAGGTCCAAAGTTAAAGGTAGCAATTATTGGATCAGGACTTGCCGGCATGTCTACTGCAGTTGAACTTTTGGATCAAGGCCATGAGGTAGATATATATGAATCAAGGCCTTTCATTGGTGGGAAGGTGGGAGCAGACAAAAACCTGCTTGTGAAGGATCACACTCACACTTTTGTCAATAAAGGAGGTGACATCGGTGAGCTTGACTTCCGGTTTCCAATTGGAGCTCCAATACATGGAATTCGGGCATTTTTGACGACAAATCAGCTCAAGACATATGATAAGGCCAGAAATGCAGTGGCTCTTGCTCTAAGTCCTGTTGTGCGGGCTCTTGTTGATCCAGATGGGGCAATGCAGGATATACGAAACTTAGATAGTATAAGCTTCTCGGACTGGTTTTTGTCAAAAGGTGGCACACGTGCAAGCATCCAGAGAATGTGGGATCCAGTTGCTTATGCCCTTGGGTTTATTGATTGTGATAATATCAGTGCGCGTTGCATGCTCACTATATTCTCATTGTTTGCCACAAAGACAGAGGCTTCATTTCTACGGATGCTTAAAGGTTCTCCTGATGTTTACCTGAGTGGGCCCATCAGAAAGTATATTGAAGAGAAAGGGGGAAGATTCCATTTAAGATGGGGATGCAGACAAATTCTTTATGACCGATCTGCTAATGGCGAGATTTATGTGACTGGAATGGCCATTTCTAAGGCTACAAATAGGAAAACCGTGAGAGCTGATGCTTATGTTGCTGCTTGTGATGTTCCCGGTATCAAAAGGTTGTTGCCGGGGGAATGGAGGGACTTGGAATTTTTCAACAATATCTACGAGCTTGTTGGCGTTCCTGTTGTTACGGTTCAACTTAGATACAATGGATGGGTTACAGAAATGCGAGATATACAAAAGTCTAGGCAACTAAAGCAAGCAACAGGATTAGATAATCTCCTGTATACCCCAGATGCAGATTTTTCTTGCTTTGCAGACCTTGCTTTAACATCGCCAGAAGATTACTACATTCCAGGACAAGGCTCCCTCCTACAATGTGTTCTTACACCAGGCGATCCTTATATGCCATTAACTAATGATGAAATCATAAAGAGAGTTTCAGAGCAGGTTTTAAAATTATTCCCATCTTCACGAGGCTTGGAGCTCACTTGGTCATCTGTTGTCAAAATCGGGCAGTCCTTGTACCGTGAGGCTCCTGGCAAAGACCCATTTAGACCTGATCAAAAGACTCCTATTAAAAACTTCTTCCTTGCTGGTTCATACACAAAGCAGGATTATATAGATAGTATGGAGGGAGCCACTCTGTCAGGCCGGCAAGCCTCTGCTTACATTTGTGATGTTGGGGAACAGCTATTTGCATTGAGAGAGAAACTCCCAGCTCTTGAATCTCAAGAATCTCCATCTTCCTCATCCCAGTTGAGTTTTGTATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_21607.p1 GENE.S_Transcript_21607~~S_Transcript_21607.p1 ORF type:complete len:541 (+),score=90.16,Amino_oxidase|PF01593.20|2e-06,Amino_oxidase|PF01593.20|1.6e-40,NAD_binding_8|PF13450.2|3.3e-08,DAO|PF01266.20|2.3e-05,DAO|PF01266.20|20 S_Transcript_21607:419-2041(+)
MAASVFFPANSAAGILHRRSDSRQNGRRLCRVRCSLDSLDTAVSDMSSNAPKGLFPPEPELYKGPKLKVAIIGSGLAGMSTAVELLDQGHEVDIYESRPFIGGKVGADKNLLVKDHTHTFVNKGGDIGELDFRFPIGAPIHGIRAFLTTNQLKTYDKARNAVALALSPVVRALVDPDGAMQDIRNLDSISFSDWFLSKGGTRASIQRMWDPVAYALGFIDCDNISARCMLTIFSLFATKTEASFLRMLKGSPDVYLSGPIRKYIEEKGGRFHLRWGCRQILYDRSANGEIYVTGMAISKATNRKTVRADAYVAACDVPGIKRLLPGEWRDLEFFNNIYELVGVPVVTVQLRYNGWVTEMRDIQKSRQLKQATGLDNLLYTPDADFSCFADLALTSPEDYYIPGQGSLLQCVLTPGDPYMPLTNDEIIKRVSEQVLKLFPSSRGLELTWSSVVKIGQSLYREAPGKDPFRPDQKTPIKNFFLAGSYTKQDYIDSMEGATLSGRQASAYICDVGEQLFALREKLPALESQESPSSSSQLSFV*

Click here to download the sequence:
Link to NCBI Protein BLAST