Transcript Information: S_Transcript_216202.p1


Annotated TAIR IDAT3G47630.2
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Mitochondrial matrix Mmp37 (InterPro:IPR015222); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:17563254-17565162 | Reverse length=332
E-Value0.0003
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.3396045041917
Replicate 20.48489647379153
Replicate 30.81066971796046
Condition 2: 8 Hour
Replicate 12.8121393824791
Replicate 21.7209114338251
Replicate 31.8739206685698
Condition 3: 24 Hour
Replicate 10.48010732946361
Replicate 20.99621149786142
Replicate 30.83149596939943


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_216202.p1 GENE.S_Transcript_216202~~S_Transcript_216202.p1 ORF type:5prime_partial len:91 (+),score=4.76 S_Transcript_216202:2-274(+)
GTGTATGGGGTTCAAGTCTTCATCCTAACAATCATGAAATCTGATAAGTCAGCCATGATTGATTGTATTCTTGGTTTGCGAGATCCTATTGACTGGCATTCACAGGTGAGCTTACGTTGGAAACTTTTCCGGTTAGATGCTCTAGTAAATTGCATATCATCAGAGAGTCTGATATCTTTTCTTATGGATGAAGAACTAGTTTGTGTGCCGAGCATAAGCACGGGTGTTATTCATATGTATTACTACAATGCACGGAAATGTTTCTCTTTTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_216202.p1 GENE.S_Transcript_216202~~S_Transcript_216202.p1 ORF type:5prime_partial len:91 (+),score=4.76 S_Transcript_216202:2-274(+)
VYGVQVFILTIMKSDKSAMIDCILGLRDPIDWHSQVSLRWKLFRLDALVNCISSESLISFLMDEELVCVPSISTGVIHMYYYNARKCFSF*

Click here to download the sequence:
Link to NCBI Protein BLAST