Transcript Information: S_Transcript_216238.p1


Annotated TAIR IDAT1G77405.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:29087145-29088521 | Forward length=458
E-Value2.8E-169
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.079679644416708
Replicate 20.52845004928179
Replicate 30.44174218164313
Condition 2: 8 Hour
Replicate 11.9154542201018
Replicate 22.6792633101469
Replicate 32.2975165083213
Condition 3: 24 Hour
Replicate 10.39242305671726
Replicate 20.67855723282477
Replicate 30.45309061805598


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_216238.p1 GENE.S_Transcript_216238~~S_Transcript_216238.p1 ORF type:complete len:334 (+),score=48.10,PPR_2|PF13041.2|55,PPR_2|PF13041.2|2.2e-09,PPR_2|PF13041.2|1.6e-13,PPR_2|PF13041.2|1.2e-06,PPR_2|PF13041.2|2.4e-14,PPR_2|PF13041.2|1.2e-06,PPR_2|PF13041.2|2.3e-05,PPR_1|PF12854.3|2.9e+03,PPR_1|PF12854.3|1.5,PPR_1|PF12854.3|3.5e-08,PPR_1|PF12854.3|2.1e-06,PPR_1|PF12854.3|1.8e+03,PPR_1|PF12854.3|1.2e-10,PPR_1|PF12854.3|0.0069,PPR_1|PF12854.3|0.0003,PPR|PF01535.16|1.2e+02,PPR|PF01535.16|0.0082,PPR|PF01535.16|0.00038,PPR|PF01535.16|0.97,PPR|PF01535.16|2.3e+02,PPR|PF01535.16|1.1e-08,PPR|PF01535.16|0.031,PPR|PF01535.16|0.095,PPR_3|PF13812.2|5e+02,PPR_3|PF13812.2|0.0071,PPR_3|PF13812.2|0.018,PPR_3|PF13812.2|44,PPR_3|PF13812.2|1.6e+04,PPR_3|PF13812.2|8.4e-06,PPR_3|PF13812.2|15,PPR_3|PF13812.2|2.6 S_Transcript_216238:551-1552(+)
ATGACCACGCAATTCTTCTACTGGGTTGAATCCCATCATGGGTTTACCCACAATGAGATTACTGTGAAAGAGATGGCTATTATCTTGGCTAAGGCCAATAAGCTACATGATTTGTGGGATTTTCTTAAGGAGATGAGTAAGAGAGAAAATGGGCTTGTTACTACAATGTCTATCACCTGTTTGATAAAATGCCTAGGTGAAGAAGGCCTTGTGAATGAGGCTATGCATGCTTTCTATAGAATGAAGCAGTTTCATTGTAAGCCTGATGTTTATGCTTATAATACAATCATTCTTGCTCTTTGTAGAGTTGGGTTCTTTAAAAAGGCCAAGTTTTTGCTTCAACAAATGGAGTTACCAGGGTTCAGATGCCCACCTGATGTGTATACTTATACAATTTTGATTAGTTCTTATTGTAAGTATAGTATGCAGACTGGTTGTAAGAAGGCGATTCGTAGGAGGTTGTGGGAGGCGAATCATTTGTTCCGGTTGATGTTGTTTAAGGGTTTTGTTCCGGATATTGTAACCTATTATAGCTTGATTGATGGATGTTGTAAGACTTACAGGATTGAGAGAGCTTTGGAGCTCTTCGAGGATATGGAGAAAAGGGGTTGTGCTCCGAATAGAGTTGCATATGATTCTATAATTAGGTACTATAGTGTGGTGAATGAGATTGATAAGGCCATTAACATGTTGAGGAGAATGAGGGAAATGGATCATGGAACGCCCACTACAAGTTCATATACGCCTATCATTCATGCTTTGTGTGAAGTGGGGAGGGTGGTTGAGGCTCGGGATTTTGTCGTTGAGTTGGTGGATGGAGGGTTAATTCCTAGGGAATATACATACAAGTTGGTCTGTGATTCCCTACATGCCAAGGGAAAGTCTGATTTGCTAGATGAAGAAACACGTCAAAAAATTGAAGATGGCATGGTAGCTAGATATAGGCAAAAACAGAAAGTTAAACCTGTGATGAACCGAAAAAAATTCTGTTCTTGCGATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_216238.p1 GENE.S_Transcript_216238~~S_Transcript_216238.p1 ORF type:complete len:334 (+),score=48.10,PPR_2|PF13041.2|55,PPR_2|PF13041.2|2.2e-09,PPR_2|PF13041.2|1.6e-13,PPR_2|PF13041.2|1.2e-06,PPR_2|PF13041.2|2.4e-14,PPR_2|PF13041.2|1.2e-06,PPR_2|PF13041.2|2.3e-05,PPR_1|PF12854.3|2.9e+03,PPR_1|PF12854.3|1.5,PPR_1|PF12854.3|3.5e-08,PPR_1|PF12854.3|2.1e-06,PPR_1|PF12854.3|1.8e+03,PPR_1|PF12854.3|1.2e-10,PPR_1|PF12854.3|0.0069,PPR_1|PF12854.3|0.0003,PPR|PF01535.16|1.2e+02,PPR|PF01535.16|0.0082,PPR|PF01535.16|0.00038,PPR|PF01535.16|0.97,PPR|PF01535.16|2.3e+02,PPR|PF01535.16|1.1e-08,PPR|PF01535.16|0.031,PPR|PF01535.16|0.095,PPR_3|PF13812.2|5e+02,PPR_3|PF13812.2|0.0071,PPR_3|PF13812.2|0.018,PPR_3|PF13812.2|44,PPR_3|PF13812.2|1.6e+04,PPR_3|PF13812.2|8.4e-06,PPR_3|PF13812.2|15,PPR_3|PF13812.2|2.6 S_Transcript_216238:551-1552(+)
MTTQFFYWVESHHGFTHNEITVKEMAIILAKANKLHDLWDFLKEMSKRENGLVTTMSITCLIKCLGEEGLVNEAMHAFYRMKQFHCKPDVYAYNTIILALCRVGFFKKAKFLLQQMELPGFRCPPDVYTYTILISSYCKYSMQTGCKKAIRRRLWEANHLFRLMLFKGFVPDIVTYYSLIDGCCKTYRIERALELFEDMEKRGCAPNRVAYDSIIRYYSVVNEIDKAINMLRRMREMDHGTPTTSSYTPIIHALCEVGRVVEARDFVVELVDGGLIPREYTYKLVCDSLHAKGKSDLLDEETRQKIEDGMVARYRQKQKVKPVMNRKKFCSCD*

Click here to download the sequence:
Link to NCBI Protein BLAST