Transcript Information: S_Transcript_21626.p1


Annotated TAIR IDAT5G04870.1
Annotated Gene Namecalcium dependent protein kinase 1
Annotated Gene Symbol(s)CPK1, ATCPK1
Annotation TypeOrtholog
Chromosome Positionchr5:1417015-1419877 | Reverse length=610
E-Value2.5e-323
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 127.012196253708
Replicate 226.034091677868
Replicate 326.03499577135
Condition 2: 8 Hour
Replicate 132.307966330457
Replicate 231.05958319482
Replicate 332.826405311671
Condition 3: 24 Hour
Replicate 122.718678830218
Replicate 223.683683097283
Replicate 321.480774485024


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_21626.p1 GENE.S_Transcript_21626~~S_Transcript_21626.p1 ORF type:complete len:600 (+),score=138.70,Pkinase|PF00069.21|1.4e-73,EF-hand_1|PF00036.28|6.1e-08,EF-hand_1|PF00036.28|0.00014,EF-hand_1|PF00036.28|1.3e-06,EF-hand_1|PF00036.28|6.9e-09,EF-hand_6|PF13405.2|2.7e-06,EF-hand_6|PF13405.2|0.18,EF-hand_6|PF13405.2|1.8e-07,EF-hand_6|PF13405.2|0.0013,EF-hand_7|PF13499.2|2.5e-12,EF-hand_7|PF13499.2|4.8e-12,Pkinase_Tyr|PF07714.13|5e-25,EF-hand_8|PF13833.2|0.00027,EF-hand_8|PF13833.2|7.4e-07,EF-hand_8|PF13833.2|0.0073,EF-hand_8|PF13833.2|4.5e-09,EF-hand_5|PF13202.2|4.2e-05,EF-hand_5|PF13202.2|0.012,EF-hand_5|PF13202.2|6.5e-05,EF-hand_5|PF13202.2|0.0021,EF-hand_4|PF12763.3|69,EF-hand_4|PF12763.3|0.0089,EF-hand_4|PF12763.3|0.0018,EF-hand_9|PF14658.2|0.12,EF-hand_9|PF14658.2|0.15 S_Transcript_21626:970-2769(+)
ATGGGGAATACTTGTGTAGGACCTAGTATTTCAAGGCATGGTTTCTTGCAAACAGTTTCAGCTGTAGTGTGGCGAGGCCGTCCTGATGATGGTGCTTCTGTTTCCAATGGAAATGGAGAGAGTCGAGATGAGTCGAATTCACCATCTCCTAAAGAGCTAAACATGCCTTTGCCTACCCAAAGTGAACCCCCTAAACAAATCACAATGCCAAAACCGGAACCTGAGCAAACCCCAATGCCACAACCACAACCACAACCCCAAGTTGAGCAAGTGGTAATACCAAAAGTAGAGGCTGAGCCAATGGAACAAGCAAAACCTAAGAAACCCCATGTTTTCAAGCGAGCACCGAGTGCAGGACTTAGGGTGGATTCTGTGTTGTTGAAGAGGACAGGAAACATTAAGGAGTTTTACACTTTGGGAAGGAAGTTAGGACAAGGGCAATTCGGAACTACATTCTTGTGTCTAGAGAAAGCCACTGGCAAAGAGTTTGCCTGTAAATCGATTGCCAAAAGGAAGTTGTTGACTGATGATGATGTGGAGGATGTGAGGAGGGAAATTCAGATAATGCATCACCTTGCAGGGCACCCGAATGTAATTTCGATCAAAGGGGCATACGAGGATGCTGTGGCAGTTCATCTTGTGATGGAACTTTGCAAAGGGGGTGAGCTTTTCGATAGGATCATTCAGCGTGGACATTACACAGAACGACAAGCAGCTGAGCTTGCCCGGACTATAGTTGGTGTTGTGCAAACCTGTCATTCTTTGGGGGTTATGCACCGGGATTTGAAGCCAGAGAACTTCCTCTTTGTTGGCCAGGAGGAGGATTCGCCTCTCAAAGCTATTGATTTTGGACTATCAATATTTTTTAAACCAGGTGAGAAGTTTAATGATGTGGTTGGAAGCCCATATTATGTTGCACCTGAAGTACTACGAAAAAGATATGGTCCAGAAGCAGATGTTTGGAGCGCTGGAGTGATAGTTTACATTCTACTGAGTGGAGTACCTCCTTTCTGGGGTGAAACCGAGCAAGGAATCTTTGAACAAGTTCTGCATGGTGATCTGGACTTTATATCAGACCCTTGGCCCAGTATTTCACAAGATGCAAAGGATGTAGTGAGAGGAATGCTTGTTCGTGACCCTAAGAGGCGCCTTACTGCTCACCAAGTTCTACGCCACCCTTGGGTACAAATTGATGGTGTGGCACCTGACAAACCTCTTGATTCTGCTGTCTTGAGTCGTCTGAAGCAGTTCAGGGCCATGAACAAACTCAAGAAAATGGCTCTTAGAGTGATTGCAGATAGCCTATCCGAGGAAGAAATTGCAGGACTTAAAGAAATGTTCAAGATGATAGACACAGACAATAGTGGCCAAATCACGTATGAAGAACTCAAGGTTGGACTTGAAAAAGCTGGCGCAAAGCTCAAGGATTCTGAAATTTATGATCTAATGCAAGCAGCAGACGTTGATAACAGCGGAACAATTGATTATGGAGAGTTTGTAGCTGCAACATTGCATCTGAACAAAGTGGAAAAAGAAGATAATTTATTTGCAGCATTTAATTACTTCGACAAGGATGGAAGTGGTTACATTACTGCGGATGAGCTTCAGCAAGCTTGTGAGGAGTTCGGAATACAAGATGCGCGGTTGGAAGAAATGATTCGGGAAGCTGATCAAGACAATGACGGGCGTATTGACTACAACGAATTTGTCGCAATGATGCAAAAAGGGAATCCAGCTCCAGGTAAGAAAGGCCAAGAGAACAATTTGAATTTCGGATTGAGAGAAGCCCTAAAAATTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_21626.p1 GENE.S_Transcript_21626~~S_Transcript_21626.p1 ORF type:complete len:600 (+),score=138.70,Pkinase|PF00069.21|1.4e-73,EF-hand_1|PF00036.28|6.1e-08,EF-hand_1|PF00036.28|0.00014,EF-hand_1|PF00036.28|1.3e-06,EF-hand_1|PF00036.28|6.9e-09,EF-hand_6|PF13405.2|2.7e-06,EF-hand_6|PF13405.2|0.18,EF-hand_6|PF13405.2|1.8e-07,EF-hand_6|PF13405.2|0.0013,EF-hand_7|PF13499.2|2.5e-12,EF-hand_7|PF13499.2|4.8e-12,Pkinase_Tyr|PF07714.13|5e-25,EF-hand_8|PF13833.2|0.00027,EF-hand_8|PF13833.2|7.4e-07,EF-hand_8|PF13833.2|0.0073,EF-hand_8|PF13833.2|4.5e-09,EF-hand_5|PF13202.2|4.2e-05,EF-hand_5|PF13202.2|0.012,EF-hand_5|PF13202.2|6.5e-05,EF-hand_5|PF13202.2|0.0021,EF-hand_4|PF12763.3|69,EF-hand_4|PF12763.3|0.0089,EF-hand_4|PF12763.3|0.0018,EF-hand_9|PF14658.2|0.12,EF-hand_9|PF14658.2|0.15 S_Transcript_21626:970-2769(+)
MGNTCVGPSISRHGFLQTVSAVVWRGRPDDGASVSNGNGESRDESNSPSPKELNMPLPTQSEPPKQITMPKPEPEQTPMPQPQPQPQVEQVVIPKVEAEPMEQAKPKKPHVFKRAPSAGLRVDSVLLKRTGNIKEFYTLGRKLGQGQFGTTFLCLEKATGKEFACKSIAKRKLLTDDDVEDVRREIQIMHHLAGHPNVISIKGAYEDAVAVHLVMELCKGGELFDRIIQRGHYTERQAAELARTIVGVVQTCHSLGVMHRDLKPENFLFVGQEEDSPLKAIDFGLSIFFKPGEKFNDVVGSPYYVAPEVLRKRYGPEADVWSAGVIVYILLSGVPPFWGETEQGIFEQVLHGDLDFISDPWPSISQDAKDVVRGMLVRDPKRRLTAHQVLRHPWVQIDGVAPDKPLDSAVLSRLKQFRAMNKLKKMALRVIADSLSEEEIAGLKEMFKMIDTDNSGQITYEELKVGLEKAGAKLKDSEIYDLMQAADVDNSGTIDYGEFVAATLHLNKVEKEDNLFAAFNYFDKDGSGYITADELQQACEEFGIQDARLEEMIREADQDNDGRIDYNEFVAMMQKGNPAPGKKGQENNLNFGLREALKI*

Click here to download the sequence:
Link to NCBI Protein BLAST