Transcript Information: S_Transcript_21639.p1


Annotated TAIR IDAT1G34220.1
Annotated Gene NameRegulator of Vps4 activity in the MVB pathway protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:12463102-12465911 | Reverse length=649
E-Value3.6E-147
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 19.2392306174966
Replicate 210.282092491898
Replicate 39.3953561180607
Condition 2: 8 Hour
Replicate 111.668609796167
Replicate 29.8773822296152
Replicate 311.623169731773
Condition 3: 24 Hour
Replicate 111.458259642236
Replicate 29.6641913514236
Replicate 310.517116629303


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_21639.p1 GENE.S_Transcript_21639~~S_Transcript_21639.p1 ORF type:complete len:530 (+),score=146.07,Ist1|PF03398.10|8.9e-61 S_Transcript_21639:363-1952(+)
ATGTCGATGCTTGATTCTTTCTTTGCCAAAGGCTTCAAGGCTTCTAAATGTAAAACTTTGCTGAAACTTACAATACCAAGAATAAAGCTGTTGAGGAATAGAAAAGAGCTTCAGCTTAAGCAAATGAGAAGGGACATTGCTAAGCTTCTTGAGACTGGTCAAGAAGCTACTGCTCGAATTCGGGTGGAGCATATAATAAGAGATGAGAATATGATGGCTGCCCAAGAGATCCTAGAACTCTACTGTGAGCTTATTGCTGTTCGCCTTCCCATCATCGAATCACAGAGGGAATGTCCATTGGACTTGAAAGAAGCAATATCAAGTATCTGCTTTGCTGCACCAAGATGTGCTGACTTGCCTGAGCTGCTGCAAGTACAGATGTCATTTGCTTCCAAATATGGAAAAGAATTTGTTGCTGCTGCGACCGAGCTTATGCCAAATTGTGGTGTTAATCGGCAGTTGATAGAGTTGCTGTCTGTCCGTGCTCCTCCTCCAGAAAAGAAATTGAAGTTGTTGAAAGAAATTGCCGAAGAGCATGAGATAGATTGGGATCCAGCTCCCTCTGAAACTGAACTTTTCAAATCCCATGAAGATCTTTTGAATGGACCATCACAATTTGTAACCGGATCTAAAGTGCCACTTCCTAGCGCAAAGCATGATGAAATTTTGTACTCTGCCTCAGTTCCTGCTGCTGGAGAACATAATGATTCTGAAGATGGCTTTGACGATTTGGAGTTTCCGGAAGTCCCCAATGTGTCATTGAGACCAGGAGCAGGTTCAGATGTGGCATCACCACAGCCTTCAGCTCCACATCAACAACCAGATCATGCATCCGTAACACAGGTCGAAAGTCCAAGAAATCCTGATTCAGTCATTGATCCTGACGATACTATACAGGCTGTAAGCCAAGTGTCACCCGAGTCTTCAGCCAATCCTGCGGAGCATAGACAATTTTTGCCATTCCTATCTCCCCCGCCATTGTCGCCAACATCGTTCCCTGCAAAAGAAAGCAGCCACCCTTCCCCATCACCATCATTGTCACCAGAATCTCGCCCTGAACAAGAAATCAATCGGTCCCCACCTCCTTCAAGGACCAAGAGCGATGCACATCTTGATTTGAATGACATATTGGCTGCTGCAAAGACTGCAGCCGAATCTGCTGAACATGCTGCTGTTGCTGCTCGCTCAGCTGCTAGTCTTGCAGAGCTCAGAATTTCCGAACTTTCCAAGAGTAAGAGCGACAAGTCCTCTGAAAGTGAATGCGAGAACCCATTTTTCGAGAATGTTCAGAATCTTGCACCTGCAGCAGAGAAAATGCAACTGGATGATAGAAATGCTTCAGGTGATTACGACAACATCGCCAGTCAGTGGAACTCAGGTGATCATTTTGAAAATAATCAAACCCCTAATGGGTCGCCTTTAGGAGATCATGCTACGAAGCAAGAGGTCCCATATCACCAGCCTCAGAGACTGCCATCGATGGATGATGATACAGAGTTCTCATACCCAAACCTTTTCAGTTCCAAGGGCGGAAAAGCGGCACCTGATTCCCATTTTCCAGACAACTCTCAACCGAGGCATGGACTGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_21639.p1 GENE.S_Transcript_21639~~S_Transcript_21639.p1 ORF type:complete len:530 (+),score=146.07,Ist1|PF03398.10|8.9e-61 S_Transcript_21639:363-1952(+)
MSMLDSFFAKGFKASKCKTLLKLTIPRIKLLRNRKELQLKQMRRDIAKLLETGQEATARIRVEHIIRDENMMAAQEILELYCELIAVRLPIIESQRECPLDLKEAISSICFAAPRCADLPELLQVQMSFASKYGKEFVAAATELMPNCGVNRQLIELLSVRAPPPEKKLKLLKEIAEEHEIDWDPAPSETELFKSHEDLLNGPSQFVTGSKVPLPSAKHDEILYSASVPAAGEHNDSEDGFDDLEFPEVPNVSLRPGAGSDVASPQPSAPHQQPDHASVTQVESPRNPDSVIDPDDTIQAVSQVSPESSANPAEHRQFLPFLSPPPLSPTSFPAKESSHPSPSPSLSPESRPEQEINRSPPPSRTKSDAHLDLNDILAAAKTAAESAEHAAVAARSAASLAELRISELSKSKSDKSSESECENPFFENVQNLAPAAEKMQLDDRNASGDYDNIASQWNSGDHFENNQTPNGSPLGDHATKQEVPYHQPQRLPSMDDDTEFSYPNLFSSKGGKAAPDSHFPDNSQPRHGL*

Click here to download the sequence:
Link to NCBI Protein BLAST