Transcript Information: S_Transcript_216392.p1


Annotated TAIR IDAT4G35130.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:16721084-16723498 | Reverse length=804
E-Value8.1E-243
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.62896310157
Replicate 20.45624675598997
Replicate 30.62656267344581
Condition 2: 8 Hour
Replicate 11.8584904412273
Replicate 21.8175061671861
Replicate 32.2669734528193
Condition 3: 24 Hour
Replicate 10.74214522937026
Replicate 20.70301335761196
Replicate 30.26078923314005


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_216392.p1 GENE.S_Transcript_216392~~S_Transcript_216392.p1 ORF type:3prime_partial len:677 (+),score=113.38,PPR_2|PF13041.2|2.4,PPR_2|PF13041.2|7.8e-09,PPR_2|PF13041.2|0.002,PPR_2|PF13041.2|1e-06,PPR_2|PF13041.2|0.58,PPR_2|PF13041.2|0.13,PPR_2|PF13041.2|7.8,PPR_2|PF13041.2|0.00019,PPR_2|PF13041.2|4.2,PPR_2|PF13041.2|1.1e-11,PPR_2|PF13041.2|0.093,PPR_2|PF13041.2|6.9,PPR_2|PF13041.2|2.1,PPR|PF01535.16|7.6,PPR|PF01535.16|0.00011,PPR|PF01535.16|0.00012,PPR|PF01535.16|0.0011,PPR|PF01535.16|29,PPR|PF01535.16|1,PPR|PF01535.16|0.02,PPR|PF01535.16|0.4,PPR|PF01535.16|0.00097,PPR|PF01535.16|0.83,PPR|PF01535.16|8.9e-07,PPR|PF01535.16|0.002,PPR|PF01535.16|0.03,PPR|PF01535.16|4.8,PPR_3|PF13812.2|4.7e+02,PPR_3|PF13812.2|0.11,PPR_3|PF13812.2|6.3,PPR_3|PF13812.2|0.14,PPR_3|PF13812.2|3.4e+02,PPR_3|PF13812.2|7.9e+03,PPR_3|PF13812.2|11,PPR_3|PF13812.2|6.7,PPR_3|PF13812.2|27,PPR_3|PF13812.2|0.0064,PPR_3|PF13812.2|0.8,PPR_3|PF13812.2|69,PPR_3|PF13812.2|2.9e+03,PPR_3|PF13812.2|0.2,PPR_1|PF12854.3|12,PPR_1|PF12854.3|69,PPR_1|PF12854.3|1.1e+02,PPR_1|PF12854.3|0.0004,PPR_1|PF12854.3|4.3,PPR_1|PF12854.3|0.024,PPR_1|PF12854.3|6e+03,PPR_1|PF12854.3|9.2,PPR_1|PF12854.3|5e+02,PPR_1|PF12854.3|37,PPR_1|PF12854.3|9.6e-06,PPR_1|PF12854.3|5.8,PPR_1|PF12854.3|0.2 S_Transcript_216392:135-2162(+)
ATGGCTACTTTATTAACCAACATCCAGTTGCCCATTTCTTACTTACCCACCAAATATTGGCTCCCAAAAACTGTGTCAACCATAGTCAAGAACCAAAAGACTGACCCTGTTATAGCAAAAACTATACCTTCCAGTTCAGCTCAAAAAACCCCACAAAAAAGACGGTTTAGCCCTTCAGAAACACCACCTAATGATACCCTTATCTCACAAACTCGCTTGCTTTCTTCTATGGTGGAATCTTGGGCATTGGAAGATGCACTTCAACTGTTTGACAAAATGACTCACAAAGATACATTTGCTTGGAATGTCATAATTAGAGCTTTAGTTGATTCAGGATTACATGAGGAGGCTATTAGTTATTATTATAGGATGCTAGTTGAAGGGCTTAAACCTGATTACTTTACTTACCCTTTTGTGATCAAGGCTTGTGTTGGGTTGTTGGCACTTTATGATGGGCAGGTGGTTCAAGCTAAGCTGATAAGAACTGGGTTGAATGCGGATGTTTATATTTGTAATTCACTTATTTCTATGTATGCTAAGATGGGTTTTGTCGAATACTCCCAGAGATTGTTTGAGGAAATGGTAACTAGGGACTTGGTGTCATGGAATTCTATGATTAGTGGGTTTGTTTCAGTTGGGGATGGGTGCAGTGCATTGAGGTATTTCTGCTGGATGCAGGAATTTGGGATGGTCCCTGATCGGTTTAGCTTGATTAGCGCACTTGGTGCGTGTTCCCTTGCAGGGTTCCTTGAGGAGGGTAAAGAGATTCATTGCCAAGTTATTAAGAATGGGCTTGAATCAGATGTCATGGTAGAAACTGCTATAATTGACATGTACTGTAAGTGTCACAGGTTAGAGTATGCAGAAAGATTCTTTAGAGGCCTAGCTCCGAGAAGTATCGGAGCTTGGAATTCTATGATAGGTGGCTATGTGCTTAATGATTCGCCCCTTGAGCCGTTTTCTTGCTTGAATAAGATGCAGGGGGAAGATAAATTAGTCCCTGATATTATCACTGCGATAAATGTACTTCCTGCTTGTGCAGAAATAGGAGCTCTTACACAGGGAAAATGCATTCATGGCTTTGCCATTAGGAAAGGGTTTTTCCCTCATTCAGTCTTGGAGACTGCTTTGGTTAATATGTATGGCAAATGTAGGAGGCTGAATTCAGCAGAGATTGTTTTCAGTCAAATGGCTTCAAAAACCCTGATTTCTTGGAATGTCATGGTTGCTGCTTATGTGCAAAATGAGAGCTATAGGAAAGCCTTAAAATTATTCCAAAGCTACTTAAAACTCAATCTGGAACCTGATGGTGTCATCATTTCTAGCATTCTGCCTGCTTTTGCTGAGTTAGCCTCAAAAAGGGTAGGTGAGCAGATTCACAGTTTCGTTGTAAAATCAGACCTTGGTTCGAATACATTCATATCAAATGCCGTTGTCTTTATGTACGCCAAATGTGGAGATCTCACAAGTGCACAGAAATTATTTGATAGTATCATTCTGAAGGATGTTGTTTCTTGGAACACAATCATTATGGCATATGCACTGCATGGTTTTGTTGACGATGCCATACAGATATTCAATGAATTGCTAGCAAAGGGCATTCAACCAAATGGAAGCACCTTTGTTTCTTTACTGTCAGCATGTAGCATTGCAGGTATGGTCGAGGAAGGGTGGAAGTACTTCAATCTTATGAAATGGGAGTACGGCATTGATCCTGGCATAGAGCATTATGGTTGTATGCTTGATCTTCTTGGTCGTACAGGCAATTTGGAATTTGCACTACGTTTCATTGATGAAATGCCTTTGGTTCCAACATCTAGAATATGGGGTTCTTTACTATCTGCAAGTAGAAACAGCAGAAACATAGAGCTGGCAGAGATTGCAGCTCAGCATATAATAACATTAGAGCATGATAATACCGGGTGTTATGTGTTGCTTGCGAATCTTTATGCTGAATCAGGGAGGTGGGAAGACGTGGAGAGAATCAACAATGTTATGAAGGAAAAAGGCATTGAAAGAAGAGTTGGT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_216392.p1 GENE.S_Transcript_216392~~S_Transcript_216392.p1 ORF type:3prime_partial len:677 (+),score=113.38,PPR_2|PF13041.2|2.4,PPR_2|PF13041.2|7.8e-09,PPR_2|PF13041.2|0.002,PPR_2|PF13041.2|1e-06,PPR_2|PF13041.2|0.58,PPR_2|PF13041.2|0.13,PPR_2|PF13041.2|7.8,PPR_2|PF13041.2|0.00019,PPR_2|PF13041.2|4.2,PPR_2|PF13041.2|1.1e-11,PPR_2|PF13041.2|0.093,PPR_2|PF13041.2|6.9,PPR_2|PF13041.2|2.1,PPR|PF01535.16|7.6,PPR|PF01535.16|0.00011,PPR|PF01535.16|0.00012,PPR|PF01535.16|0.0011,PPR|PF01535.16|29,PPR|PF01535.16|1,PPR|PF01535.16|0.02,PPR|PF01535.16|0.4,PPR|PF01535.16|0.00097,PPR|PF01535.16|0.83,PPR|PF01535.16|8.9e-07,PPR|PF01535.16|0.002,PPR|PF01535.16|0.03,PPR|PF01535.16|4.8,PPR_3|PF13812.2|4.7e+02,PPR_3|PF13812.2|0.11,PPR_3|PF13812.2|6.3,PPR_3|PF13812.2|0.14,PPR_3|PF13812.2|3.4e+02,PPR_3|PF13812.2|7.9e+03,PPR_3|PF13812.2|11,PPR_3|PF13812.2|6.7,PPR_3|PF13812.2|27,PPR_3|PF13812.2|0.0064,PPR_3|PF13812.2|0.8,PPR_3|PF13812.2|69,PPR_3|PF13812.2|2.9e+03,PPR_3|PF13812.2|0.2,PPR_1|PF12854.3|12,PPR_1|PF12854.3|69,PPR_1|PF12854.3|1.1e+02,PPR_1|PF12854.3|0.0004,PPR_1|PF12854.3|4.3,PPR_1|PF12854.3|0.024,PPR_1|PF12854.3|6e+03,PPR_1|PF12854.3|9.2,PPR_1|PF12854.3|5e+02,PPR_1|PF12854.3|37,PPR_1|PF12854.3|9.6e-06,PPR_1|PF12854.3|5.8,PPR_1|PF12854.3|0.2 S_Transcript_216392:135-2162(+)
MATLLTNIQLPISYLPTKYWLPKTVSTIVKNQKTDPVIAKTIPSSSAQKTPQKRRFSPSETPPNDTLISQTRLLSSMVESWALEDALQLFDKMTHKDTFAWNVIIRALVDSGLHEEAISYYYRMLVEGLKPDYFTYPFVIKACVGLLALYDGQVVQAKLIRTGLNADVYICNSLISMYAKMGFVEYSQRLFEEMVTRDLVSWNSMISGFVSVGDGCSALRYFCWMQEFGMVPDRFSLISALGACSLAGFLEEGKEIHCQVIKNGLESDVMVETAIIDMYCKCHRLEYAERFFRGLAPRSIGAWNSMIGGYVLNDSPLEPFSCLNKMQGEDKLVPDIITAINVLPACAEIGALTQGKCIHGFAIRKGFFPHSVLETALVNMYGKCRRLNSAEIVFSQMASKTLISWNVMVAAYVQNESYRKALKLFQSYLKLNLEPDGVIISSILPAFAELASKRVGEQIHSFVVKSDLGSNTFISNAVVFMYAKCGDLTSAQKLFDSIILKDVVSWNTIIMAYALHGFVDDAIQIFNELLAKGIQPNGSTFVSLLSACSIAGMVEEGWKYFNLMKWEYGIDPGIEHYGCMLDLLGRTGNLEFALRFIDEMPLVPTSRIWGSLLSASRNSRNIELAEIAAQHIITLEHDNTGCYVLLANLYAESGRWEDVERINNVMKEKGIERRVG

Click here to download the sequence:
Link to NCBI Protein BLAST