Transcript Information: S_Transcript_216507.p1


Annotated TAIR IDAT1G18760.1
Annotated Gene NameZinc finger, C3HC4 type (RING finger) family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:6471150-6471824 | Reverse length=224
E-Value2E-08
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.0518972820229
Replicate 20.52322821085015
Replicate 30.87475428064509
Condition 2: 8 Hour
Replicate 10.25287024091462
Replicate 20.44213139604203
Replicate 30.3370094483001
Condition 3: 24 Hour
Replicate 10.1726868260126
Replicate 20.35832113164186
Replicate 30.29907562535711


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_216507.p1 GENE.S_Transcript_216507~~S_Transcript_216507.p1 ORF type:3prime_partial len:253 (-),score=9.68,zf-RING_2|PF13639.2|6.2e-13,zf-RING_11|PF17123.1|1.3e-09,zf-C3HC4_2|PF13923.2|1.5e-06,zf-rbx1|PF12678.3|1.4e-05,zf-C3HC4|PF00097.21|1.5e-05 S_Transcript_216507:2-757(-)
ATGAATCTCAGATCTTTGTTTTATCAATGCGTATCTAGCAAGCAAATCCGAGTATTTAACAGCGAAATCATCGTTTTGGCCGGAAAAAGTTTCACGATGAGATTACTGGCAGGTAATATCGTGTACAACTTCACCGTCACACATGACGAAACCCTAGATTCCACCAGCGAGAACGAATTCCAAATCACCGTACACTATCGCAAGTTCAATGGCGGCGGTGGTTCTTCATCACCGGAGACAGAGCTTCAACGATCGATCCGATTCTCCCGCACCGGAGATCGATCTTCTTCGTCGGCGCCATTAATGGCGGAGGTGCTTCAAGAATTCGAGGTTCCGGAAGGAGACATGGTAGACCACTTCAAGTTCTACCTCGAGAGGATATCGAGGCGAAACCTACGCCGAGAAGGAATCATTCGTGTCCACGTCAAGGTCGACGCGAGGGTGATGTCTTCGGATAGGGCTGCGGATGTGCAGTCGAGGATGATGAGGAGAGAGAATCGACAAAGTCAGGCGGTGAGGGTGGTGCCGGAGACGTCGATGACGCCATCATCGCCGGCGAAGAAGTCGGTGGTGGAGGCGCTGGTGAGGGAGAGGTTGAGGAGTGAAGGAGAAGAGGAGAGAGAATGTTCGATTTGTTTGGAAGGGTTTGGGTTAGGGGTTGAGGTTATTAGGATGCCCTGCTTGCATGTCTACCATAAGGAGTGCATCTTAAGGTGGCTTGAAAGAACTCATTTTTGCCCCTTTTGTAGATTCAAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_216507.p1 GENE.S_Transcript_216507~~S_Transcript_216507.p1 ORF type:3prime_partial len:253 (-),score=9.68,zf-RING_2|PF13639.2|6.2e-13,zf-RING_11|PF17123.1|1.3e-09,zf-C3HC4_2|PF13923.2|1.5e-06,zf-rbx1|PF12678.3|1.4e-05,zf-C3HC4|PF00097.21|1.5e-05 S_Transcript_216507:2-757(-)
MNLRSLFYQCVSSKQIRVFNSEIIVLAGKSFTMRLLAGNIVYNFTVTHDETLDSTSENEFQITVHYRKFNGGGGSSSPETELQRSIRFSRTGDRSSSSAPLMAEVLQEFEVPEGDMVDHFKFYLERISRRNLRREGIIRVHVKVDARVMSSDRAADVQSRMMRRENRQSQAVRVVPETSMTPSSPAKKSVVEALVRERLRSEGEEERECSICLEGFGLGVEVIRMPCLHVYHKECILRWLERTHFCPFCRFK

Click here to download the sequence:
Link to NCBI Protein BLAST