Transcript Information: S_Transcript_21652.p1


Annotated TAIR IDAT4G09730.1
Annotated Gene NameRH39
Annotated Gene Symbol(s)RH39
Annotation TypeOrtholog
Chromosome Positionchr4:6136333-6139510 | Forward length=621
E-Value1.8E-271
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 113.625556344669
Replicate 215.216789976904
Replicate 317.922489649649
Condition 2: 8 Hour
Replicate 130.830077679917
Replicate 229.092869458149
Replicate 326.727487335442
Condition 3: 24 Hour
Replicate 111.338388045894
Replicate 212.818319382391
Replicate 311.419289497944


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_21652.p1 GENE.S_Transcript_21652~~S_Transcript_21652.p1 ORF type:complete len:709 (+),score=164.15,DEAD|PF00270.25|9.4e-40,DEAD|PF00270.25|7.4e+03,Helicase_C|PF00271.27|5.2e+03,Helicase_C|PF00271.27|1.9e-24 S_Transcript_21652:150-2129(+)
ATGGGAGGAACAGGAAGAACATTTCTAAGTATCTCTCTTTCCTCCAATCTCATTTCCCACTCCCTTTTCTCATCATCCAGACACTCCTCACTTCTTAAACCCTCATTTCCCACCAGGGTTTTACTAGGGTTTAGACCTTTATGCTCCACAACCACCACCACAACCCCAGCACCTACTAATGTTGAAACAGAGCAAATCCCAAACCCCACAAAGCAATCCATCCTTCTTGAAAGACTCAGACTTAGACACCTCAAAGATGGTGCTAAAACCCCACAAGCAAAACCCCCTCTTGGTTCAAAAAAATCAGGTCAAAGTATGGCTGATGTTGAAAGTGAGGGGAGTTTGAAGAAAAAGGGTGGGGCCCAGAAAGGGGTTTCAAGTTTTAGTGAGTTGGGTTTGAGTGAAGAGGTCATGGGTGCTTTGGAAGAGATGGGTATTTCAGTTCCTACTGAAATTCAGTGTATTGGGATTCCTGTTGTGCTTGATGGCCATAGTGTGGTTTTGGGTTCTCATACTGGGTCTGGCAAGACTTTAGCTTACATGCTACCCATTGTTCAGCTTCTGAGGCGGGATGAAGAATTATTAGGCATTCAAATGAAGCCTAGGCGTCCACGAGCAGTTGTGCTCTGCCCAACAAGGGAACTTTCAGAACAGGTATATCATGTGGCAAAGTCCATCAGCCATCATGCACGGTTTAGGTCTACCATGGTAAGTGGTGGTGGCCGATTAAGACCCCAAGAAGATTCACTTAATCTCCCAATAGATATGGTGGTTGGCACCCCTGGGAGGATTCTACAACATATTCAAGATGGGAATATTGTCTATGGTGATATCAAGTATTTGGTCTTGGATGAGGCAGACACCATGTTTGATCATGGTTTTGGTCCTGAGATTCGCAATTTTCTTAGCCCACTCAAGAATCGTGCTTCAAAAGCAAATGACTCTGGGTTTCAAACTGTCTTGGTTGCTGCAACGATGACGAAGGCTGTGCAAAAGCTGATTGATGAGGAGTTCCAAGGCATCACTCATTTGCGCACTTCAACTTTGCACAAAAAAGTTGCTTCTGCTCGTCATGATTTCATTAGGCTTACAGGTGCTGAAAACAAACTGGAAGCACTGCTACAGGTTCTTGAACCCAGCTTGGCAAAGGGAAACAAGGTGATGGTTTTCTGTAACACTTTGAATTCAAGTCGTGCAGTGGATCACTTCCTTGGGGAAAATCAAATCTACACAGTTAATTACCATGGCGAAGTTCCAGCAGAACAAAGGGTTGAGAATCTCAAAAAGTTTAAGGATGAAGATGGGGATTGCCCAACTCTGGTCTGCACAGATCTGGCTGCTAGGGGACTGGACTTGGATGTGGATCATGTTATCATGTTTGACTTCCCGAAAAATTCTGTTGATTATCTCCATCGCACGGGAAGAACTGCACGTATGGGGGCAAAAGGGAAAGTCACCAGTTTGGTTGCGAAGAGAGATGTGCCTTTGGCTACTCGGATCGAAGAAGCTATCAAGAAAAACGAAAGCATAGAATCTCTTAGTGTAGATAGTGTGAGGAGGGATATTGCAAGGACAAGGATCACTCAACAGAAAGCAATTAATACCAGGGTGATGAAGGCTTCTACTGCCAAAAAGAGTAGTGGAAAGGCTGCTTCAGTGAAGTCATCAAGTGCGTCCGACAAAGTAGTTTCTTCCCAGGCATCTACAAAGAAGACTTCCGGAGGAAAATATGGCAAAGTAAGCGGCCAGTCTCGAGGAAAATCCAGCAAAGTAAGCGGCCAGTCTCAAGGAAAATCCGGCGAAGTAAGCAGCCAGTCTAAAGGAAAATCTGTGAAAGCATTTGGTCCATCCAAATTTGGGAAGAAATCCAGTAAGGGGTCGAAGTCATCAAGCAAAAGTACAACGAAAAAATCTGCAAAGATCAGTGTTGTTGGATTTCGAGGGCGAAGTTCTTCCTCCAGTGACAAAAAGCTAACTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_21652.p1 GENE.S_Transcript_21652~~S_Transcript_21652.p1 ORF type:complete len:709 (+),score=164.15,DEAD|PF00270.25|9.4e-40,DEAD|PF00270.25|7.4e+03,Helicase_C|PF00271.27|5.2e+03,Helicase_C|PF00271.27|1.9e-24 S_Transcript_21652:150-2129(+)
MGGTGRTFLSISLSSNLISHSLFSSSRHSSLLKPSFPTRVLLGFRPLCSTTTTTTPAPTNVETEQIPNPTKQSILLERLRLRHLKDGAKTPQAKPPLGSKKSGQSMADVESEGSLKKKGGAQKGVSSFSELGLSEEVMGALEEMGISVPTEIQCIGIPVVLDGHSVVLGSHTGSGKTLAYMLPIVQLLRRDEELLGIQMKPRRPRAVVLCPTRELSEQVYHVAKSISHHARFRSTMVSGGGRLRPQEDSLNLPIDMVVGTPGRILQHIQDGNIVYGDIKYLVLDEADTMFDHGFGPEIRNFLSPLKNRASKANDSGFQTVLVAATMTKAVQKLIDEEFQGITHLRTSTLHKKVASARHDFIRLTGAENKLEALLQVLEPSLAKGNKVMVFCNTLNSSRAVDHFLGENQIYTVNYHGEVPAEQRVENLKKFKDEDGDCPTLVCTDLAARGLDLDVDHVIMFDFPKNSVDYLHRTGRTARMGAKGKVTSLVAKRDVPLATRIEEAIKKNESIESLSVDSVRRDIARTRITQQKAINTRVMKASTAKKSSGKAASVKSSSASDKVVSSQASTKKTSGGKYGKVSGQSRGKSSKVSGQSQGKSGEVSSQSKGKSVKAFGPSKFGKKSSKGSKSSSKSTTKKSAKISVVGFRGRSSSSSDKKLT*

Click here to download the sequence:
Link to NCBI Protein BLAST