Transcript Information: S_Transcript_216648.p1


Annotated TAIR IDAT5G20480.1
Annotated Gene NameEF-TU receptor
Annotated Gene Symbol(s)EFR
Annotation TypeHomolog
Chromosome Positionchr5:6922497-6925679 | Forward length=1031
E-Value1E-154
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.6786124300771
Replicate 21.5365674724682
Replicate 31.9145547314119
Condition 2: 8 Hour
Replicate 13.4748336390598
Replicate 22.8516022576261
Replicate 33.8374127751412
Condition 3: 24 Hour
Replicate 11.0621034023022
Replicate 20.86366693260719
Replicate 30.92801214631176


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_216648.p1 GENE.S_Transcript_216648~~S_Transcript_216648.p1 ORF type:complete len:761 (+),score=79.29,Pkinase|PF00069.21|1e-42,Pkinase_Tyr|PF07714.13|6.1e-39,LRR_8|PF13855.2|3.6,LRR_8|PF13855.2|0.21,LRR_8|PF13855.2|0.65,LRR_8|PF13855.2|4.8,LRR_8|PF13855.2|0.059,LRR_8|PF13855.2|0.15,LRR_8|PF13855.2|6.9e-05,LRR_8|PF13855.2|1e-06,LRR_8|PF13855.2|1e-07,LRR_4|PF12799.3|3e+02,LRR_4|PF12799.3|0.35,LRR_4|PF12799.3|0.87,LRR_4|PF12799.3|8,LRR_4|PF12799.3|4.2,LRR_4|PF12799.3|7.4,LRR_4|PF12799.3|0.0046,LRR_4|PF12799.3|0.0013 S_Transcript_216648:828-3110(+)
ATGTCTTCACTAACTATGTTAGATTTAGATGATAATAGAATGTCAGGTACTCTTCCCTATGATATGTTTTCCAAATTAAGCAATTCGGCAGAAGCATTCTACCTTGGCGCGAATCACTTCTCTGGCCCCTTGCCCGTTTCTTTACCCAATGCCTCCGGTCTCATTATAGTCGACTTCAGTTTTAACAACTTCACTGGGCATGTTCCTTTGTTATGGAATCTCCCAAAACTTCAACGCCTGATTTTGAGTAATAACGAGCTTGTAACTGATGGTGAACATGGATGGGATTTCCTTACTTCTCTCACTAATTCTACTCAACTTCAATTCTTCAGTTTGCACCATAACTTGGCCACTGGTAAGGTTCCCTCCTCTGTTGGAAATCTTTCTCGTTGTTTATCTAAATTTTACATATCTGAAAACCACATAGAAGGGAGCCTACCAGCTGAAATCGGTAATTTGGTCAGCCTCTCTGTGCTGTCAGTTCATACTAATTCATTCAGGGGAAATATCCCACCATCTTTAGGAAAGCTGACAAACCTGGAAGACCTTTTTTTGCAATACAATAATTTTTCAGCAGAGATACCAGAATCACTTGGTAACTTGACTGTCCTATCAGATATGCGTTTGTATGCAAACTATCTAACTGGAACCATAACATCAACTTTTGGAAATCTTCAGCGCCTTGAAGTACTAGGCCTCTTAAACAATATGCTAAACGGAACAATCCCTGTTGATATCTTTAGCATTACAAATATTAACTACCTTGACCTTTCGTTCAACTTCTTGAGTGGTCATATCCCTCACCAAATAGGCAAACTAAAGATGACTAATTCTATAACTTTATCCCATAACCATTTGAAAGGAGACATACCGTCTTCTATTGGAGGTTGCTCTAGTCTCGAGTCCCTATATTTGGACCACAATTCACTTCATGGTCAGATACCAAGTGTAATTGGTGATATGAAGGGGATTGAGTTCATTGACCTTTCATCAAACAACCTCTCTGGAGGGATTCCTATCTCTCTAAACTCTCTTCATTCTCTACAGAAATTGAACCTCTCCATGAATCAGCTTGAAGGTATTGTACCATCAATCGGTGTATTCACAAACGCAACTGTTGTTTTACTTTTTGGAAACCATCAACTTTGTGGAGGGATACCAAAATTCAATCTGCCCAAATGCAATCTCCCAGACACAAAACATGCAAAAAGGTCAAGAGCAAAGATGATCATAGGACTCGTGATCGGTTTGGTGGCACCTTTCACTCTAATAATAGGAGCTTTAATCTTCCTACTGTCAAGAAGAAGACGACAACATAATACTCCAACTGTGGTCCTTGACAATGGTTTCGCACATGAGTACAAGTTGTACTCATATCACGAGCTAAAATCAGCTACTCAAAATTTCAGCTCACAAAACTTGCTTGGGCAAGGTAGTTTTGGATCAGTTTACAAGGCAATATTTACTGATGGAACAATTGCAGCTATCAAGGTTTTTAACTTGGCACTACAAAAGGGTTCCAAGAGTTTTCTGGTGGAGTGTGAAGCCTTACGAAATGTTAGGCATCGAAACCTGGTAAAAATAATTAGTGTGTGCTCAACCGAAGATTTTAAAGCATTAATACTCCCGTTCATGTCCAAAGGAAGCTTGGACCAGTGGCTTCACAAGATAAATGAGTTAGACAATGAAGTTGTTGGAGGTCTAGATTTAAGACAGAGGTTGATAATTGCAAAGGAAGTTGCGATTGCTATGGAGTATTTGCACCATGAATGTGAAACTCCCATTGTGCACTGTGATCTCAAACCTAGCAATGTTTTGCTAGACATAGACATGTGTGCACATGTAGCTGATTTTGGGATTGCAAGAATACTTAATGATCCCGACAAGCACCCGACTAGTAGTACTCTAGGCCTGAAAGGATCTTTTGGCTATATTGCTCCAGAGTATGGAATAAGCGGAGGTGTTTCCACAAAAGGAGATGTGTATAGCTATGGGATTCTAGTGCTTGAAATGTTCACCGGAAAGAGGCCTACAGATGATTCTTTTACTGAAGAATCAAACTTACAAGGATGGGTTGCAAAGGCCTTGACCAACAATGTCACAGATATTCTGGATCATAATCTTGCGAAAAACAGAGTAGTTGCTAATGAAAAAGCTGAAGGCATGATCGCTAGTACCATTGAGCTTGGGCTAAAATGTGCTAGCATATCACCTGAAGCCCGACCAACAATGAGAGATGTCTCTCTACTGATTAGGAAGATCATTGCCCAACTCCCGACCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_216648.p1 GENE.S_Transcript_216648~~S_Transcript_216648.p1 ORF type:complete len:761 (+),score=79.29,Pkinase|PF00069.21|1e-42,Pkinase_Tyr|PF07714.13|6.1e-39,LRR_8|PF13855.2|3.6,LRR_8|PF13855.2|0.21,LRR_8|PF13855.2|0.65,LRR_8|PF13855.2|4.8,LRR_8|PF13855.2|0.059,LRR_8|PF13855.2|0.15,LRR_8|PF13855.2|6.9e-05,LRR_8|PF13855.2|1e-06,LRR_8|PF13855.2|1e-07,LRR_4|PF12799.3|3e+02,LRR_4|PF12799.3|0.35,LRR_4|PF12799.3|0.87,LRR_4|PF12799.3|8,LRR_4|PF12799.3|4.2,LRR_4|PF12799.3|7.4,LRR_4|PF12799.3|0.0046,LRR_4|PF12799.3|0.0013 S_Transcript_216648:828-3110(+)
MSSLTMLDLDDNRMSGTLPYDMFSKLSNSAEAFYLGANHFSGPLPVSLPNASGLIIVDFSFNNFTGHVPLLWNLPKLQRLILSNNELVTDGEHGWDFLTSLTNSTQLQFFSLHHNLATGKVPSSVGNLSRCLSKFYISENHIEGSLPAEIGNLVSLSVLSVHTNSFRGNIPPSLGKLTNLEDLFLQYNNFSAEIPESLGNLTVLSDMRLYANYLTGTITSTFGNLQRLEVLGLLNNMLNGTIPVDIFSITNINYLDLSFNFLSGHIPHQIGKLKMTNSITLSHNHLKGDIPSSIGGCSSLESLYLDHNSLHGQIPSVIGDMKGIEFIDLSSNNLSGGIPISLNSLHSLQKLNLSMNQLEGIVPSIGVFTNATVVLLFGNHQLCGGIPKFNLPKCNLPDTKHAKRSRAKMIIGLVIGLVAPFTLIIGALIFLLSRRRRQHNTPTVVLDNGFAHEYKLYSYHELKSATQNFSSQNLLGQGSFGSVYKAIFTDGTIAAIKVFNLALQKGSKSFLVECEALRNVRHRNLVKIISVCSTEDFKALILPFMSKGSLDQWLHKINELDNEVVGGLDLRQRLIIAKEVAIAMEYLHHECETPIVHCDLKPSNVLLDIDMCAHVADFGIARILNDPDKHPTSSTLGLKGSFGYIAPEYGISGGVSTKGDVYSYGILVLEMFTGKRPTDDSFTEESNLQGWVAKALTNNVTDILDHNLAKNRVVANEKAEGMIASTIELGLKCASISPEARPTMRDVSLLIRKIIAQLPT*

Click here to download the sequence:
Link to NCBI Protein BLAST