Transcript Information: S_Transcript_216651.p1


Annotated TAIR IDAT5G20480.1
Annotated Gene NameEF-TU receptor
Annotated Gene Symbol(s)EFR
Annotation TypeHomolog
Chromosome Positionchr5:6922497-6925679 | Forward length=1031
E-Value3E-129
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.94372344805605
Replicate 20.75107368706433
Replicate 30.52319818676881
Condition 2: 8 Hour
Replicate 10.57472683124188
Replicate 20.38079742365492
Replicate 30.99776307938211
Condition 3: 24 Hour
Replicate 10
Replicate 20.45006150648066
Replicate 30.39353544461883


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_216651.p1 GENE.S_Transcript_216651~~S_Transcript_216651.p1 ORF type:complete len:705 (+),score=103.39,Pkinase|PF00069.21|3.3e-31,Pkinase_Tyr|PF07714.13|1.2e-25,LRR_8|PF13855.2|0.34,LRR_8|PF13855.2|0.11,LRR_8|PF13855.2|0.0044,LRR_8|PF13855.2|0.09,LRR_8|PF13855.2|1.1e-05,LRR_8|PF13855.2|3.1e-06,LRR_8|PF13855.2|0.00012,LRR_4|PF12799.3|3.6,LRR_4|PF12799.3|0.0064,LRR_4|PF12799.3|0.029,LRR_4|PF12799.3|0.024,LRR_4|PF12799.3|0.27,LRR_4|PF12799.3|5.5e+02,LRR_4|PF12799.3|7.6e-05,LRR_4|PF12799.3|2.2,LRR_1|PF00560.29|1.4e+03,LRR_1|PF00560.29|3.6e+03,LRR_1|PF00560.29|6.7e+03,LRR_1|PF00560.29|34,LRR_1|PF00560.29|1.7,LRR_1|PF00560.29|1.3,LRR_1|PF00560.29|3e+02,LRR_1|PF00560.29|94,LRR_1|PF00560.29|74,LRR_1|PF00560.29|21,LRR_1|PF00560.29|0.72,LRR_1|PF00560.29|5.6e+02,LRR_1|PF00560.29|37 S_Transcript_216651:891-3005(+)
ATGTTTTTCAGATTAAGTAATTTATCTTTGATTTTCCTTGGTGGGAATCAGTTATCTGGCCACTTACCTATTTCTTTAGGCAATGCTTCTAGTCTCACTAATGTTGATTTGGGTGCTAATAATTTCATTGGGCATATTCCATTGCTATCTAGTCTCCCAGAACTTCAAGAACTAACTTTGGAAACTAACAACCTTGTCACTGATGGTGAACACGGATGGGATTTCCTTACTTCTCTGGCTAATTCTACACAGCTTCAACACTTGTATTTGGCGCAAAACTTGGCCACTGGTAAGCTTCCCTCCTCTATAGGGAACCTTTCTCAACACTTGTCTGAGTTTATCATAGCGGAAAATCACTTAGAAGGAAGCTTACCTGCTGAAATTGGTGATTTGGTCGGCCTCTCCGAACTCGATCTTTCATTCAATTCATTCAGTGGACACATTCCACCATTTATAGGAAACATGTCAAAGCTAGAAGTGATTTATATGGATGGCAATAGTTTTTCAGGGGAGATACCGGAGTCATTTGGTAACTTGAATGTCTTGTCAGTTATGAGCATACGTAATAACTATCTAAGTGGAACCATACCATCAAGTGTCGGAAACCTTCAACATCTTCAACAACTCGACCTCTCAGACAATATGCTAAATAGAACCATCCCTATTGAGATCTTTGACATTCCAAGCTTAGATTTGTACCTTAATCTTTCATTTAACTCCTTGAGCGGTAATATCCCTGAACAAATAGGTAACTTAAAGATGATTGATACAATAGATTTATCCAGTAATCAACTCTCGGGAGATATACCATCTTCTATAGGAAGTTGTTCGGCTCTTGAGTACCTAAATTTGTCCAACAATTCTCTTGACGGTCAAATACCAAAGACACTGGGTAATATAAAGGGGTTTGAGTTCATTGATTTTTCATCAAACAACTTGTCTGGAGAGATTCCCGTCTCTCTAATCTCTCTTCGTTTTCTACAATACTTGAATCTCTCCATGAATCACCTTGAAGGTATGGTACCATCAAGGGGCATATTTGCAAACGCAACTGTTGTTTCGCTTTCTGGAAACCATCAACTTTGTGGAGGAATAGCAGAGTTGAATCTTCCCAAATGTAACCTCCCGCATGCAAAGAGGTCAAAAACAAAGTTGATCATAGGACTTGTAGTCGGTGTAGTGGCGCCTTTCATTCTCATAGTAGGAGCTCTAGTTGTTCTGTTATTGAGAAAAACATGGCTACGGAAAGCTCCACATGTGGCCCCTGAAAGTGCTTTCCCACACGAGTACAAGTTGTACTCATATCATGAGCTGAAATCAGCTACTGCAAATTTTAGCTCAACAAACTTGGTTGGGCAAGGTAGTTTTGGATCAGTTTACAAGGCAAGATTTGCTGATGGAACTATTGCCGCGGTCAAGGTATTTAACTTGGAGCTCCATGGGGCTTCCAAGAGTTTTGTCACTGAGTGTGAAGCCTTACGAAATGTCAGGCATCGAAACCTTGTCAAAATAATTAGTGTGTGCTCGACGGATAATTTTAAGGCCTTAATACTTCCCTTCATGCCAAAAGGAAGCTTGGACGAATGCATTCACAAAAGAAATAAGTTGCATGAGGAAGTAATTGGAGGTCTAGATTTAAGGCAAAGGTTGATGATTGCAAAGGAAGTTGCAGCTGCTATAGAGTACTTGCACTATGAGTGTGGAACTCCTATTGTGCACTGTGATCTCAAGCCCAACAATGTGTTGCTTGATGCAAACATGTGTGCACACGTTGCTGATTTTGGGATAGCAAGGGTACTTTTTGCTCCCAATAATAACCCCACTAGCAGCAGTCTAGGCTTGAAAGGATCCTTTGGTTACATCGCTCCAGGAAAGAGACCTACAGATGAAGCATTTGCCGAAACATTGGACATACAAAGATGGGTTGCAAATGGCCTCACTAATAATGTTGAAGACATTTTGGATGATGGTATAAGAAGTGGATTGGATAATAATCAGAGTATTGAAGGGGTGATAAGCATACTTGAGATTGGGCTGAAATGTGCTAGCACATCACCTGAAACACTACCTACCATGAGAGATGTGTCCTTGCTACTCGAGAAAGTCATTGCCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_216651.p1 GENE.S_Transcript_216651~~S_Transcript_216651.p1 ORF type:complete len:705 (+),score=103.39,Pkinase|PF00069.21|3.3e-31,Pkinase_Tyr|PF07714.13|1.2e-25,LRR_8|PF13855.2|0.34,LRR_8|PF13855.2|0.11,LRR_8|PF13855.2|0.0044,LRR_8|PF13855.2|0.09,LRR_8|PF13855.2|1.1e-05,LRR_8|PF13855.2|3.1e-06,LRR_8|PF13855.2|0.00012,LRR_4|PF12799.3|3.6,LRR_4|PF12799.3|0.0064,LRR_4|PF12799.3|0.029,LRR_4|PF12799.3|0.024,LRR_4|PF12799.3|0.27,LRR_4|PF12799.3|5.5e+02,LRR_4|PF12799.3|7.6e-05,LRR_4|PF12799.3|2.2,LRR_1|PF00560.29|1.4e+03,LRR_1|PF00560.29|3.6e+03,LRR_1|PF00560.29|6.7e+03,LRR_1|PF00560.29|34,LRR_1|PF00560.29|1.7,LRR_1|PF00560.29|1.3,LRR_1|PF00560.29|3e+02,LRR_1|PF00560.29|94,LRR_1|PF00560.29|74,LRR_1|PF00560.29|21,LRR_1|PF00560.29|0.72,LRR_1|PF00560.29|5.6e+02,LRR_1|PF00560.29|37 S_Transcript_216651:891-3005(+)
MFFRLSNLSLIFLGGNQLSGHLPISLGNASSLTNVDLGANNFIGHIPLLSSLPELQELTLETNNLVTDGEHGWDFLTSLANSTQLQHLYLAQNLATGKLPSSIGNLSQHLSEFIIAENHLEGSLPAEIGDLVGLSELDLSFNSFSGHIPPFIGNMSKLEVIYMDGNSFSGEIPESFGNLNVLSVMSIRNNYLSGTIPSSVGNLQHLQQLDLSDNMLNRTIPIEIFDIPSLDLYLNLSFNSLSGNIPEQIGNLKMIDTIDLSSNQLSGDIPSSIGSCSALEYLNLSNNSLDGQIPKTLGNIKGFEFIDFSSNNLSGEIPVSLISLRFLQYLNLSMNHLEGMVPSRGIFANATVVSLSGNHQLCGGIAELNLPKCNLPHAKRSKTKLIIGLVVGVVAPFILIVGALVVLLLRKTWLRKAPHVAPESAFPHEYKLYSYHELKSATANFSSTNLVGQGSFGSVYKARFADGTIAAVKVFNLELHGASKSFVTECEALRNVRHRNLVKIISVCSTDNFKALILPFMPKGSLDECIHKRNKLHEEVIGGLDLRQRLMIAKEVAAAIEYLHYECGTPIVHCDLKPNNVLLDANMCAHVADFGIARVLFAPNNNPTSSSLGLKGSFGYIAPGKRPTDEAFAETLDIQRWVANGLTNNVEDILDDGIRSGLDNNQSIEGVISILEIGLKCASTSPETLPTMRDVSLLLEKVIA*

Click here to download the sequence:
Link to NCBI Protein BLAST